Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   WFA81_RS06500 Genome accession   NZ_CP147890
Coordinates   1339938..1341179 (+) Length   413 a.a.
NCBI ID   WP_003565798.1    Uniprot ID   A0A0C9PVU8
Organism   Lacticaseibacillus paracasei strain CUDS0725     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1334938..1346179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WFA81_RS06475 tsf 1335399..1336280 (+) 882 WP_003565808.1 translation elongation factor Ts -
  WFA81_RS06480 pyrH 1336516..1337235 (+) 720 WP_003565806.1 UMP kinase -
  WFA81_RS06485 frr 1337235..1337792 (+) 558 WP_003598868.1 ribosome recycling factor -
  WFA81_RS06490 - 1338345..1339097 (+) 753 WP_012491639.1 isoprenyl transferase -
  WFA81_RS06495 - 1339133..1339921 (+) 789 WP_003565800.1 phosphatidate cytidylyltransferase -
  WFA81_RS06500 eeP 1339938..1341179 (+) 1242 WP_003565798.1 RIP metalloprotease RseP Regulator
  WFA81_RS06505 - 1341204..1342931 (+) 1728 WP_011674540.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45107.72 Da        Isoelectric Point: 8.6663

>NTDB_id=949292 WFA81_RS06500 WP_003565798.1 1339938..1341179(+) (eeP) [Lacticaseibacillus paracasei strain CUDS0725]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSLILNDQGKVVRINASDKTTLAGGMPVQVSRVDLVKDLVIEGYPNGDETALQTWQVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLLVNFAGPMNNFLLAILAFIIYGLFFGVQVLNTNQIGTVVPGYPAAEAGLKSNATVQTIDGQKMSSFTDL
SKIVSKNAGKSVTFTVKENGKSKNIVIKPNKEGKIGVEAHVDKSPANAIPFGFSQTWNLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGIQGLLFFMGYLSLGLGITNLLPIPVLDGGKILLNLIEIIRRKPLKPETEGVVTMIGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=949292 WFA81_RS06500 WP_003565798.1 1339938..1341179(+) (eeP) [Lacticaseibacillus paracasei strain CUDS0725]
ATGACCACTATCATCGCCTTTATCGTTATCTTCTGCATTCTTGTGGTAGTTCACGAGTTTGGCCATTTTTACTTTGCAAA
ACGCAGCGGCATTCTAGTCCGGGAATTTTCGATCGGTATGGGCCCGAAGCTGTGGGCGTCGCACAAGAACAATACGACCT
ACACGCTGCGGTTGCTACCACTTGGCGGATACGTCCGCATGGCTGGCTGGCAAGATGAGGAGGACGAGATTAAGCCCGGG
ACGATGCTGAGCCTGATTCTTAACGATCAAGGCAAGGTTGTCCGGATTAATGCCAGTGACAAAACGACTTTGGCCGGCGG
AATGCCGGTTCAAGTGAGTCGCGTCGATTTAGTTAAGGATCTGGTGATTGAAGGTTATCCAAACGGGGATGAAACAGCCT
TGCAAACTTGGCAGGTTGACCACGATGCGACGATCATTGAAGAAGACGGAACCGAGGTTCAGATCGCGCCAGAAGACGTT
CAGTTTCAAAACGCCCCGGTTTGGCGCCGGTTATTGGTCAACTTCGCCGGTCCGATGAATAACTTCTTACTCGCGATTCT
AGCTTTTATTATTTACGGTCTGTTTTTTGGTGTTCAGGTGCTCAATACCAACCAAATCGGAACAGTTGTGCCAGGTTATC
CAGCCGCAGAAGCTGGTCTTAAGTCCAATGCGACGGTGCAAACGATTGACGGTCAAAAAATGTCATCATTCACGGATCTT
TCAAAGATCGTCAGTAAAAATGCCGGTAAATCAGTGACATTTACCGTGAAGGAAAACGGTAAAAGCAAGAACATCGTGAT
CAAGCCGAATAAAGAAGGCAAGATCGGGGTTGAAGCACACGTCGATAAGTCCCCAGCAAATGCCATTCCTTTTGGTTTTT
CTCAAACTTGGAATTTGGCTGTCCGCACTTGGGACGTGCTCAAATCCATGGTGACCGGCGGTTTTTCACTCAATAAACTG
GCTGGCCCGGTTGGTATTTATACCATGACGAGTCAAAGTGCCAAAGGCGGTATTCAAGGATTACTCTTCTTTATGGGTTA
CTTGAGTCTCGGCTTAGGGATTACCAATTTGTTGCCGATTCCAGTGCTTGATGGTGGTAAAATTCTTTTGAACCTGATCG
AAATTATTCGCCGTAAGCCATTAAAACCGGAAACGGAAGGCGTTGTGACCATGATTGGCTTGGGCCTGATGGTTCTATTA
ATGCTAGCGGTCACAATTAACGATATCATGCGCTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-257)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C9PVU8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.292

100

0.506
  eeP Streptococcus thermophilus LMD-9

49.057

100

0.504