Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   ACHGLA_RS16150 Genome accession   NZ_CP171841
Coordinates   3692017..3693141 (+) Length   374 a.a.
NCBI ID   WP_209495406.1    Uniprot ID   -
Organism   Streptomyces sp. YH02     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3687017..3698141
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHGLA_RS16135 (ACHGLA_16135) - 3687449..3688276 (+) 828 WP_395361224.1 hypothetical protein -
  ACHGLA_RS16140 (ACHGLA_16140) - 3688336..3690135 (-) 1800 WP_395361225.1 hypothetical protein -
  ACHGLA_RS16145 (ACHGLA_16145) radA/sms 3690297..3691700 (+) 1404 WP_395361226.1 DNA repair protein RadA Machinery gene
  ACHGLA_RS16150 (ACHGLA_16150) disA 3692017..3693141 (+) 1125 WP_209495406.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  ACHGLA_RS16155 (ACHGLA_16155) - 3693297..3694160 (-) 864 WP_395361227.1 hypothetical protein -
  ACHGLA_RS16160 (ACHGLA_16160) - 3694408..3695079 (+) 672 WP_395361228.1 phosphatase PAP2 family protein -
  ACHGLA_RS16165 (ACHGLA_16165) - 3695260..3696183 (+) 924 WP_395367419.1 A/G-specific adenine glycosylase -
  ACHGLA_RS16170 (ACHGLA_16170) - 3696516..3697088 (+) 573 WP_318210663.1 SigE family RNA polymerase sigma factor -
  ACHGLA_RS16175 (ACHGLA_16175) - 3697076..3697837 (+) 762 WP_395361229.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40164.02 Da        Isoelectric Point: 5.0197

>NTDB_id=949291 ACHGLA_RS16150 WP_209495406.1 3692017..3693141(+) (disA) [Streptomyces sp. YH02]
MAAKDGAAAPGKSGAGSGNEALMRAALSAVAPGTALRDGLERILRGNTGGLIVLGLDKTVDSMCTGGFVLDVEFAATRLR
ELCKLDGALVLDKDITKIHRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALTHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=949291 ACHGLA_RS16150 WP_209495406.1 3692017..3693141(+) (disA) [Streptomyces sp. YH02]
GTGGCAGCCAAGGACGGGGCAGCAGCTCCTGGAAAGTCCGGCGCGGGCTCCGGCAACGAAGCGCTGATGCGCGCCGCCCT
GAGCGCCGTCGCGCCGGGCACCGCGCTGCGTGACGGCCTGGAGCGGATCCTCCGCGGCAACACGGGCGGTCTCATCGTGC
TCGGCCTCGACAAGACGGTCGACTCGATGTGCACCGGCGGTTTCGTGCTGGACGTCGAGTTCGCCGCCACGCGCCTGCGT
GAGCTGTGCAAACTCGACGGCGCGCTCGTCCTCGACAAGGACATCACCAAGATCCACCGCGCGGGCGTGCAGCTGGTTCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCCGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGTGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTCGCGACCCTGGAGCGCTACAAGCTCCGGCTCGACGAGGTGGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTCACCGCCGTCGCCCAGCGGCTCGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTCGAGCTCGGCACGGACGGGCGGCTCCTCTCGCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGGGAGCTGGTCGTCCGGGACTACGTGCCGGAACCCACCGCCAAGCGCTCGCGGACGGTCGCGGA
GGCGCTCACCGAGCTGGACGCGCTGACCCACACCGAGCTGCTCGAACTGCCGGTCGTGGCGCGGGCGCTGGGCTACAGCG
GCTCGCCCGAGACTCTCGACTCGGCCGTCTCGCCGCGCGGCTACCGGCTCCTCGCCAAGGTGCCGCGACTGCCGGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCGGCCAGCGTGGACGACCTCCAGACCGTGGA
CGGCGTCGGCGAGGCCCGCGCCCGCAGCGTGCGGGAGGGCCTGTCCCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433