Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   WFE12_RS20240 Genome accession   NZ_CP147877
Coordinates   3848542..3848661 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3843542..3853661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WFE12_RS20215 albG 3843706..3844407 (+) 702 WP_003243391.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  WFE12_RS20220 ywhL 3844413..3845789 (-) 1377 WP_003244415.1 YncE family protein -
  WFE12_RS20225 ywhK 3845828..3847183 (-) 1356 WP_003227552.1 YncE family protein -
  WFE12_RS20230 - 3847180..3847410 (-) 231 WP_009968328.1 hypothetical protein -
  WFE12_RS20235 rapF 3847413..3848558 (+) 1146 WP_003227549.1 response regulator aspartate phosphatase RapF Regulator
  WFE12_RS20240 phrF 3848542..3848661 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  WFE12_RS20245 ywhH 3848760..3849233 (+) 474 WP_003227547.1 YbaK/EbsC family protein -
  WFE12_RS20250 speB 3849265..3850137 (-) 873 WP_003227545.1 agmatinase -
  WFE12_RS20255 speE 3850198..3851028 (-) 831 WP_003227543.1 spermidine synthase -
  WFE12_RS20260 pbpG 3851230..3853305 (+) 2076 WP_003227540.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=949182 WFE12_RS20240 WP_009968329.1 3848542..3848661(+) (phrF) [Bacillus subtilis subsp. subtilis str. 168]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=949182 WFE12_RS20240 WP_009968329.1 3848542..3848661(+) (phrF) [Bacillus subtilis subsp. subtilis str. 168]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487