Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   UXR38_RS07750 Genome accession   NZ_CP147872
Coordinates   1624104..1624790 (-) Length   228 a.a.
NCBI ID   WP_001802022.1    Uniprot ID   A0A7U7EYP5
Organism   Staphylococcus aureus strain BSN131     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1619104..1629790
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXR38_RS07730 (UXR38_07730) rpsT 1620018..1620269 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  UXR38_RS07735 (UXR38_07735) holA 1620314..1621288 (-) 975 WP_001282563.1 DNA polymerase III subunit delta -
  UXR38_RS07740 (UXR38_07740) comEC 1621345..1623546 (-) 2202 WP_001557362.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  UXR38_RS07745 (UXR38_07745) - 1623551..1624012 (-) 462 WP_000439693.1 ComE operon protein 2 -
  UXR38_RS07750 (UXR38_07750) comEA 1624104..1624790 (-) 687 WP_001802022.1 ComEA family DNA-binding protein Machinery gene
  UXR38_RS07755 (UXR38_07755) - 1624830..1625546 (-) 717 Protein_1522 class I SAM-dependent methyltransferase -
  UXR38_RS07760 (UXR38_07760) rsfS 1625549..1625902 (-) 354 WP_001088020.1 ribosome silencing factor -
  UXR38_RS07765 (UXR38_07765) yqeK 1625903..1626487 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  UXR38_RS07770 (UXR38_07770) nadD 1626477..1627046 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  UXR38_RS07775 (UXR38_07775) yhbY 1627049..1627339 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  UXR38_RS07780 (UXR38_07780) aroE 1627343..1628149 (-) 807 WP_000666757.1 shikimate dehydrogenase -
  UXR38_RS07785 (UXR38_07785) yqeH 1628163..1629263 (-) 1101 WP_001280137.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25900.65 Da        Isoelectric Point: 9.6751

>NTDB_id=949083 UXR38_RS07750 WP_001802022.1 1624104..1624790(-) (comEA) [Staphylococcus aureus strain BSN131]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENNSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=949083 UXR38_RS07750 WP_001802022.1 1624104..1624790(-) (comEA) [Staphylococcus aureus strain BSN131]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAATAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCGAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EYP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus N315

100

100

1
  comEA Staphylococcus aureus MW2

97.368

100

0.974