Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   V7R88_RS07850 Genome accession   NZ_CP147647
Coordinates   1682277..1683554 (-) Length   425 a.a.
NCBI ID   WP_057716937.1    Uniprot ID   -
Organism   Lactiplantibacillus argentoratensis strain D1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1677277..1688554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V7R88_RS07845 - 1680528..1682237 (-) 1710 WP_057716938.1 proline--tRNA ligase -
  V7R88_RS07850 eeP 1682277..1683554 (-) 1278 WP_057716937.1 RIP metalloprotease RseP Regulator
  V7R88_RS07855 - 1683592..1684377 (-) 786 WP_054396552.1 phosphatidate cytidylyltransferase -
  V7R88_RS07860 - 1684393..1685172 (-) 780 WP_057716936.1 isoprenyl transferase -
  V7R88_RS07865 frr 1685292..1685855 (-) 564 WP_003640736.1 ribosome recycling factor -
  V7R88_RS07870 pyrH 1685857..1686579 (-) 723 WP_003640737.1 UMP kinase -
  V7R88_RS07875 tsf 1686779..1687657 (-) 879 WP_003644498.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45862.40 Da        Isoelectric Point: 9.9302

>NTDB_id=947816 V7R88_RS07850 WP_057716937.1 1682277..1683554(-) (eeP) [Lactiplantibacillus argentoratensis strain D1]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQVGSDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKRYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTANSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLNLTIKRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=947816 V7R88_RS07850 WP_057716937.1 1682277..1683554(-) (eeP) [Lactiplantibacillus argentoratensis strain D1]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTCTATTTTGC
CAAAAAGGCTGGGATCCTAGTGCGTGAATTTTCTGTCGGGATGGGACCCAAGGCGGTCGCGTTTCGTCGTAATGCCACGA
CTTATACGTTGCGGTTTCTGCCAATCGGTGGTTACGTGCGAATGGCCGGCGTGGCTGACGATGAGGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTACAAGTTGGTTCAGATGGAATTGTTCATTCAATCAATGCTAGTAAGAAGACGACGTTGTT
CAATGGTATTCCGCTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAGGGTTATGAGAACGGAGACGAGA
GTGAAGTCAAACGATACGCCGTTGACCATGACGCGACGATCGTCGAAAGTGATGGTACCGAGGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGCTATGGCAACGCATGCTGACCAATTTTGCCGGCCCGATGAATAACTTCATCTTGGC
CATCATTACGTTTGCAATTCTGGCCTTTATGCAGGGTGGCGTTACGAGTACAACGACGCACGTTGCGGCGACGACAGCAA
ACTCAGTTGCCCGTACGGCTGGCATCCAAAAAGGCGATCAAATCGTGGCGGTTAACGGTAAAAAGATGACGAGTGCTCAG
TCGATTTCGCTGTTGATTCAAGATAGTCCGAAACAACGGTTGAACCTGACCATCAAAAGAGCTGGTCAGACCAAAAAAAT
CGCGGTGACCCCCGCTGCTAAGACGGTCTCTGGTAACCGAATCGGCCAAATCGGGGTCCAATGGGCGACCAAGACCGACA
CGAGCCTGGGAGCCAAGTTAGCATACGGCTTTACTGGTTCATGGGGAATCACCAAGCAGATTTTTCAAGTGCTCGGTCGG
ATGGTCACGCACGGTTTTAGTTTGAACGATTTAGGCGGGCCGGTGGCGATTTTTGCGACGACCTCTCAAGCCGCTAAGTC
CGGGGTGCGTACGGTGATCTATTTACTCGCTGTATTGTCGATCAACCTTGGAATTGTTAATTTATTACCAATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTTCGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(210-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494
  eeP Streptococcus thermophilus LMG 18311

49.065

100

0.494