Detailed information NTG0946354

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: WBI56_RS12895
• Genome accession: NZ_CP147492
• Coordinates: 2501898..2504228 (-)
• Length: 776 a.a.
• NCBI ID: WP_338730592.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MC4-2
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2496898..2509228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WBI56_RS12860 (WBI56_12860)	yqxA	2497237..2497575 (-)	339	WP_014477382.1	YqxA family protein	-
WBI56_RS12865 (WBI56_12865)	spoIIP	2497592..2498797 (-)	1206	WP_014477383.1	spore autolysin SpoIIP	-
WBI56_RS12870 (WBI56_12870)	gpr	2498860..2499966 (-)	1107	WP_014480309.1	GPR endopeptidase	-
WBI56_RS12875 (WBI56_12875)	rpsT	2500170..2500436 (+)	267	WP_003229989.1	30S ribosomal protein S20	-
WBI56_RS12880 (WBI56_12880)	holA	2500451..2501494 (-)	1044	WP_029317888.1	DNA polymerase III subunit delta	-
WBI56_RS12885 (WBI56_12885)	-	2501534..2501683 (-)	150	WP_003229985.1	hypothetical protein	-
WBI56_RS12890 (WBI56_12890)	yqzM	2501724..2501858 (+)	135	WP_003229983.1	YqzM family protein	-
WBI56_RS12895 (WBI56_12895)	comEC	2501898..2504228 (-)	2331	WP_338730592.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
WBI56_RS12900 (WBI56_12900)	comEB	2504232..2504801 (-)	570	WP_003229978.1	ComE operon protein 2	-
WBI56_RS12905 (WBI56_12905)	comEA	2504868..2505485 (-)	618	WP_338730593.1	competence protein ComEA	Machinery gene
WBI56_RS12910 (WBI56_12910)	comER	2505569..2506390 (+)	822	WP_338730594.1	late competence protein ComER	-
WBI56_RS12915 (WBI56_12915)	yqeM	2506456..2507199 (-)	744	WP_151870165.1	class I SAM-dependent methyltransferase	-
WBI56_RS12920 (WBI56_12920)	rsfS	2507196..2507552 (-)	357	WP_014480315.1	ribosome silencing factor	-
WBI56_RS12925 (WBI56_12925)	yqeK	2507570..2508130 (-)	561	WP_017696284.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
WBI56_RS12930 (WBI56_12930)	nadD	2508120..2508689 (-)	570	WP_004398676.1	nicotinate-nucleotide adenylyltransferase	-
WBI56_RS12935 (WBI56_12935)	yhbY	2508701..2508991 (-)	291	WP_003226133.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86711.26 Da
• Isoelectric Point: 7.1613

>NTDB_id=946354 WBI56_RS12895 WP_338730592.1 2501898..2504228(-) (comEC) [Bacillus subtilis strain MC4-2]
MRNSRLLLPMAAASATAGITAAAYFPAIFLFILFLLIILIKTRHAFLIIVCFFSFILFFVLYAVTDSQNVSSYRQGTYQF
KAVIDTIPKIDGDRMTMMVETPDKEKWAAAYRIQSAGEKEQLLYIEPGMSCELTGTLEEPNHATVPGAFDYNEYLYRQHI
HWNYSITSIQNCNEPENFKYKVLSLRKHIISFTNGLLPPDSAGIVQALTVGDRFYVEDEVLTAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASILLLLFLPLYVMLTGAAPSVLRAALMSGVYLAGSLVKWRVHSATAICLSYIVLLLFNP
YHLFEAGFQLSFAVSFSLILSSSIFHQVKTSLGQLTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGA
VAGVLLLSLSASFGRLFFSWFDLLISWTNRLITNIADVDVFTIMIAHPAPVLLFLFTVAIILLLMAIEKRSLSQLMVTGG
ICCTVLFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLQTAREEGVTIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWLETGVLSWILTGDLEKEGEQEVMDVFPNIKADVLKVGHHGSKGSTGEEFIQQLQPKTAIISAGKN
NRYHHPHQKVLQLLQRHSIRVLRTDQNGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=946354 WBI56_RS12895 WP_338730592.1 2501898..2504228(-) (comEC) [Bacillus subtilis strain MC4-2]
ATGCGTAATTCGCGTTTGTTATTGCCTATGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCCCCGC
TATTTTTCTTTTCATCCTCTTTCTCCTCATCATTTTAATCAAAACGAGGCACGCTTTTCTCATTATTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGTACTGTATGCAGTCACAGATTCTCAGAATGTCTCTTCCTATCGGCAGGGAACCTATCAATTC
AAGGCAGTGATTGACACTATTCCCAAAATTGACGGCGACCGTATGACTATGATGGTTGAGACACCTGATAAGGAAAAATG
GGCTGCTGCGTATCGCATTCAGTCTGCTGGTGAAAAAGAACAGCTGTTATACATAGAACCAGGAATGTCATGTGAGTTGA
CTGGTACATTGGAAGAACCGAATCACGCAACTGTGCCGGGTGCATTTGATTATAACGAGTATCTTTATCGGCAGCATATT
CATTGGAACTACTCTATCACGTCTATCCAAAACTGCAACGAACCTGAAAATTTTAAGTACAAGGTGCTCAGCTTGAGAAA
ACATATCATATCATTCACAAACGGCCTTCTGCCTCCTGATTCGGCAGGGATTGTACAGGCACTTACAGTTGGTGACAGAT
TTTATGTGGAGGATGAAGTGCTTACCGCGTATCAAAAGCTTGGTGTTGTCCATCTCCTGGCAATATCAGGACTCCACGTG
GGGATTTTGACAGCAGGTTTGTTTTATATCATGATTCGCCTTGGTATAACTAGAGAAAAGGCGTCAATTCTGTTGCTGTT
ATTTCTGCCGCTCTATGTGATGTTGACCGGCGCTGCTCCTTCAGTGCTACGCGCCGCTCTCATGTCGGGTGTTTACTTAG
CTGGAAGCCTTGTCAAATGGCGTGTCCACTCTGCAACTGCAATTTGTCTTTCATACATCGTCCTTCTGCTCTTCAATCCT
TATCATCTCTTTGAAGCCGGTTTTCAGCTATCGTTCGCCGTCAGTTTTTCTTTAATTCTATCCTCTTCTATTTTTCATCA
GGTTAAAACCTCCTTGGGGCAGCTGACAATTGTATCACTCATCGCTCAGCTGGGCTCGCTTCCGATTCTCCTGTATCATT
TTCATCAGTTTTCTATCATCAGCGTACCGATGAATATGTTGATGGTACCATTTTATACCTTCTGTATTTTGCCGGGAGCT
GTAGCAGGTGTTCTTCTATTAAGTCTTTCCGCTTCGTTTGGGAGATTGTTTTTCAGCTGGTTTGATTTATTGATAAGCTG
GACCAATAGGCTAATCACAAACATTGCAGATGTTGATGTGTTCACGATTATGATCGCACATCCTGCACCTGTTTTGCTTT
TTTTATTCACGGTTGCGATCATCCTATTGCTTATGGCGATTGAAAAACGCTCCTTGTCGCAGTTGATGGTAACCGGAGGC
ATTTGCTGCACGGTGCTGTTTCTGCTCTTTATATATCCGTGTCTTAGTTCCGAAGGAGAAGTGGATATGATAGATATTGG
ACAGGGTGACAGCATGTTTGTAGGTGCTCCGCATCAGCGGGGTCGTGTCTTAATTGATACCGGCGGCACTTTGTCTTACT
CGTCAGAGCCTTGGCGCGAAAAACAGCATCCGTTTTCACTGGGGGAAAAGGTGCTGATTCCGTTTTTAACTGCTAAGGGA
ATCAAACAGCTTGACGCTTTAATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACTCTGCTGAAGCATCA
TAAAGTAAAGCGCCTCGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGATGAGAAAGTGCTGCAGACAGCCAGAGAAG
AGGGAGTGACAATTGAAGAGGTGAAGCGAGGCGATGTATTGCAAATAAAGGATTTGCAGTTCCATGTACTGTCACCTGAA
ACACCTGATCCGGCAAGCAAAAATAATTCCTCTCTCGTTCTGTGGTTGGAGACGGGCGTTCTGAGCTGGATTTTGACGGG
TGATCTGGAGAAAGAAGGGGAACAGGAGGTGATGGACGTGTTTCCAAATATTAAAGCAGATGTCTTAAAGGTGGGGCACC
ATGGGAGCAAAGGCTCTACCGGTGAAGAATTCATCCAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCCGGGAAAAAC
AATCGGTACCATCATCCTCATCAAAAAGTTCTGCAACTATTACAGAGACATTCTATCCGCGTGCTGCGAACAGATCAAAA
CGGAACGATCCAATATAGATACAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-170)

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Competence protein (Competence) (208-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	97.68	100	0.977