Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   WBI56_RS06070 Genome accession   NZ_CP147492
Coordinates   1176688..1176879 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain MC4-2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1171688..1181879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WBI56_RS06040 (WBI56_06040) argF 1172550..1173509 (+) 960 WP_032721338.1 ornithine carbamoyltransferase -
  WBI56_RS06045 (WBI56_06045) yjzC 1173595..1173774 (+) 180 WP_003245356.1 YjzC family protein -
  WBI56_RS06050 (WBI56_06050) yjzD 1173821..1174006 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  WBI56_RS06055 (WBI56_06055) - 1174257..1174991 (+) 735 WP_032721340.1 hypothetical protein -
  WBI56_RS06060 (WBI56_06060) - 1175072..1175629 (+) 558 WP_003232974.1 hypothetical protein -
  WBI56_RS06065 (WBI56_06065) med 1175720..1176673 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  WBI56_RS06070 (WBI56_06070) comZ 1176688..1176879 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  WBI56_RS06075 (WBI56_06075) yjzB 1176909..1177145 (-) 237 WP_015383342.1 spore coat protein YjzB -
  WBI56_RS06080 (WBI56_06080) fabH 1177310..1178248 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  WBI56_RS06085 (WBI56_06085) fabF 1178271..1179512 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  WBI56_RS06090 (WBI56_06090) yjaZ 1179588..1180373 (+) 786 WP_212129612.1 DUF2268 domain-containing protein -
  WBI56_RS06095 (WBI56_06095) appD 1180532..1181518 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=946325 WBI56_RS06070 WP_003224559.1 1176688..1176879(+) (comZ) [Bacillus subtilis strain MC4-2]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=946325 WBI56_RS06070 WP_003224559.1 1176688..1176879(+) (comZ) [Bacillus subtilis strain MC4-2]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1