Detailed information NTG0946312

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: WBI56_RS02160
• Genome accession: NZ_CP147492
• Coordinates: 427347..428495 (+)
• Length: 382 a.a.
• NCBI ID: WP_338732280.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MC4-2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 422347..433495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WBI56_RS02140 (WBI56_02140)	yclH	422723..423403 (-)	681	WP_338732274.1	ABC transporter ATP-binding protein	-
WBI56_RS02145 (WBI56_02145)	yclI	423419..424879 (-)	1461	WP_338732276.1	ABC transporter permease	-
WBI56_RS02150 (WBI56_02150)	yclJ	425092..425775 (+)	684	WP_015482792.1	two-component system response regulator YclJ	-
WBI56_RS02155 (WBI56_02155)	yclK	425762..427183 (+)	1422	WP_072173981.1	two-component system sensor histidine kinase YclK	-
WBI56_RS02160 (WBI56_02160)	rapC	427347..428495 (+)	1149	WP_338732280.1	response regulator aspartate phosphatase RapC	Regulator
WBI56_RS02165 (WBI56_02165)	phrC	428479..428601 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
WBI56_RS02170 (WBI56_02170)	yczM	428699..428788 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
WBI56_RS02175 (WBI56_02175)	yczN	428870..428983 (-)	114	WP_014478831.1	YjcZ family sporulation protein	-
WBI56_RS02180 (WBI56_02180)	thrD	429136..430500 (-)	1365	WP_338732285.1	aspartate kinase	-
WBI56_RS02185 (WBI56_02185)	ceuB	430885..431835 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
WBI56_RS02190 (WBI56_02190)	yclO	431828..432775 (+)	948	WP_014475805.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45591.66 Da
• Isoelectric Point: 5.1295

>NTDB_id=946312 WBI56_RS02160 WP_338732280.1 427347..428495(+) (rapC) [Bacillus subtilis strain MC4-2]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMKHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLG
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=946312 WBI56_RS02160 WP_338732280.1 427347..428495(+) (rapC) [Bacillus subtilis strain MC4-2]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGAAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGGC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.215	100	0.992
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568