Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   V7R92_RS09990 Genome accession   NZ_CP147490
Coordinates   2053739..2055016 (-) Length   425 a.a.
NCBI ID   WP_043023143.1    Uniprot ID   A0AAJ5FKW3
Organism   Levilactobacillus brevis strain LMT1-73     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2048739..2060016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V7R92_RS09985 - 2051994..2053703 (-) 1710 WP_085763146.1 proline--tRNA ligase -
  V7R92_RS09990 eeP 2053739..2055016 (-) 1278 WP_043023143.1 RIP metalloprotease RseP Regulator
  V7R92_RS09995 - 2055112..2055903 (-) 792 WP_043023144.1 phosphatidate cytidylyltransferase -
  V7R92_RS10000 - 2055925..2056713 (-) 789 WP_085763145.1 isoprenyl transferase -
  V7R92_RS10005 - 2056816..2057238 (-) 423 WP_011668021.1 hypothetical protein -
  V7R92_RS10010 frr 2057265..2057828 (-) 564 WP_024525164.1 ribosome recycling factor -
  V7R92_RS10015 pyrH 2057825..2058547 (-) 723 WP_011668022.1 UMP kinase -
  V7R92_RS10020 tsf 2058694..2059578 (-) 885 WP_011668023.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45983.26 Da        Isoelectric Point: 7.2020

>NTDB_id=946297 V7R92_RS09990 WP_043023143.1 2053739..2055016(-) (eeP) [Levilactobacillus brevis strain LMT1-73]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLVYHRGKDGTTYTLRLLPVGGYVRMAGAEDDEEELK
PGTPVSLYVGADEKVERINTSKKSTLFNGIPLEVTATDLEDELWIEGYENGDESAIKRYAVAHDATVIESDGTELQIAPK
DVQFQSASLGRRLMTNFAGPMNNILLAIVTFMLMSFAQGGVSMGTNQVQVADSPVSVAKQAGVKTNDKITAVNGRKTTSW
TDLSTAIQPLANKKTTLTIQRGSATKHITVTPKGETSNGKTVGMIGITQAQDKSIGAILASGFTQTWTMTKALFGALWHM
VSGHFSLNDLGGPVAIFATTSQATKFGLVGVLNFLAFLSINLAIVNLLPIPALDGGKILLNFIEAIRRKPLSENVEAAIT
LIGVGFLVLLMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=946297 V7R92_RS09990 WP_043023143.1 2053739..2055016(-) (eeP) [Levilactobacillus brevis strain LMT1-73]
GTGATTACAACGATTATTACCTTTATCATTGTCTTTGGGATTTTGGTCATTGTCCATGAATTCGGGCATTTTTACTTTGC
CAAGCGAGGCGGCATTCTCGTCCGTGAATTCTCGATTGGAATGGGGCCAAAATTGGTTTACCACCGTGGCAAAGATGGCA
CGACTTACACGCTGCGGTTATTACCAGTGGGCGGTTACGTCCGGATGGCGGGTGCTGAAGATGACGAAGAAGAGCTGAAA
CCGGGAACGCCAGTTAGCCTGTACGTGGGCGCTGACGAAAAGGTTGAACGAATCAATACCAGCAAAAAATCCACGTTATT
TAACGGTATTCCGTTAGAAGTTACCGCAACGGATCTAGAGGATGAGTTGTGGATTGAAGGCTATGAAAATGGTGACGAAA
GTGCCATTAAGCGCTATGCGGTTGCTCACGATGCCACGGTGATTGAAAGCGACGGGACGGAGCTACAAATTGCCCCGAAG
GACGTTCAATTTCAGTCGGCATCATTAGGCCGACGATTGATGACGAACTTCGCTGGACCGATGAACAATATCTTATTAGC
GATTGTTACCTTTATGCTGATGTCCTTTGCTCAGGGTGGCGTTTCAATGGGCACGAATCAGGTTCAAGTAGCTGATTCAC
CGGTATCAGTGGCGAAACAGGCTGGCGTGAAGACCAACGATAAGATTACGGCAGTCAACGGTCGAAAGACCACCAGCTGG
ACCGATCTTAGTACCGCGATTCAGCCATTGGCCAACAAAAAAACAACGCTGACGATTCAAAGAGGATCGGCGACCAAACA
CATTACAGTGACACCTAAAGGTGAAACTTCCAACGGTAAAACGGTGGGGATGATTGGGATCACGCAAGCCCAAGATAAGA
GCATTGGGGCCATCTTAGCTTCTGGATTTACACAGACGTGGACGATGACCAAAGCGTTGTTTGGGGCTTTGTGGCACATG
GTTTCTGGTCACTTTAGTTTGAACGATTTAGGCGGACCAGTCGCCATTTTTGCCACAACCTCACAGGCCACCAAGTTTGG
CTTGGTTGGCGTGTTAAATTTCTTAGCCTTTTTATCAATTAATTTGGCAATTGTGAACTTACTGCCGATTCCAGCCTTGG
ATGGTGGTAAAATATTATTAAACTTTATTGAAGCTATTCGGCGTAAGCCGCTTTCAGAAAATGTGGAAGCTGCCATTACG
TTGATTGGCGTGGGGTTCTTAGTTCTGCTTATGTTACTGGTGACGTGGAATGATATTGAACGCTACTTTATTCATTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(214-261)

Peptidase family M50 (Peptidase_M50)

(7-410)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.941

100

0.489
  eeP Streptococcus thermophilus LMD-9

48.941

100

0.489