Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ACF0HW_RS18260 Genome accession   NZ_CP171208
Coordinates   3672244..3673071 (-) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain HN11     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 3667244..3678071
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF0HW_RS18235 abrB 3669584..3669874 (+) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator
  ACF0HW_RS18240 rsmI 3669924..3670805 (-) 882 WP_011996168.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACF0HW_RS18245 - 3670780..3671079 (-) 300 WP_007409921.1 GIY-YIG nuclease family protein -
  ACF0HW_RS18250 - 3671066..3671809 (-) 744 WP_004264717.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ACF0HW_RS18255 yabA 3671870..3672229 (-) 360 WP_004264720.1 replication initiation-control protein YabA -
  ACF0HW_RS18260 yaaT 3672244..3673071 (-) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  ACF0HW_RS18265 holB 3673074..3674063 (-) 990 WP_007409919.1 DNA polymerase III subunit delta' -
  ACF0HW_RS18270 - 3674075..3674515 (-) 441 WP_011996167.1 YaaR family protein -
  ACF0HW_RS18275 darA 3674528..3674857 (-) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  ACF0HW_RS18280 tmk 3674928..3675566 (-) 639 WP_007615155.1 dTMP kinase -
  ACF0HW_RS18285 - 3675563..3676996 (-) 1434 WP_011996166.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=945762 ACF0HW_RS18260 WP_004264723.1 3672244..3673071(-) (yaaT) [Bacillus amyloliquefaciens strain HN11]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=945762 ACF0HW_RS18260 WP_004264723.1 3672244..3673071(-) (yaaT) [Bacillus amyloliquefaciens strain HN11]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGGAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAGTT
TACATTTGACCGCAATAAAGTCATTTTTTACTTTACAGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGACGAGGCGAAAATGCTCGGCGGTATCGGACCA
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967