Detailed information NTG0945286

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: WAA16_RS05435
• Genome accession: NZ_CP146984
• Coordinates: 1115057..1116019 (+)
• Length: 320 a.a.
• NCBI ID: WP_034663299.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain S9
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1110057..1121019

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WAA16_RS05405 (WAA16_05405)	argF	1110387..1111337 (+)	951	WP_106039528.1	ornithine carbamoyltransferase	-
WAA16_RS05410 (WAA16_05410)	-	1111440..1111619 (+)	180	WP_034663316.1	YjzC family protein	-
WAA16_RS05415 (WAA16_05415)	-	1111788..1113053 (+)	1266	WP_338712404.1	MFS transporter	-
WAA16_RS05420 (WAA16_05420)	-	1113172..1113366 (-)	195	WP_003211779.1	YjzD family protein	-
WAA16_RS05425 (WAA16_05425)	-	1113578..1114318 (+)	741	WP_106036690.1	hypothetical protein	-
WAA16_RS05430 (WAA16_05430)	-	1114394..1114966 (+)	573	WP_106036691.1	nad binding enzyme	-
WAA16_RS05435 (WAA16_05435)	med	1115057..1116019 (+)	963	WP_034663299.1	BMP family ABC transporter substrate-binding protein	Regulator
WAA16_RS05440 (WAA16_05440)	comZ	1116030..1116227 (+)	198	WP_003211983.1	ComZ family protein	Regulator
WAA16_RS05445 (WAA16_05445)	-	1116237..1116470 (-)	234	WP_034663296.1	hypothetical protein	-
WAA16_RS05450 (WAA16_05450)	-	1116640..1117578 (+)	939	WP_012009552.1	beta-ketoacyl-ACP synthase III	-
WAA16_RS05455 (WAA16_05455)	fabF	1117600..1118841 (+)	1242	WP_106036692.1	beta-ketoacyl-ACP synthase II	-
WAA16_RS05460 (WAA16_05460)	-	1118919..1119713 (+)	795	WP_034663290.1	DUF2268 domain-containing protein	-
WAA16_RS05465 (WAA16_05465)	-	1119882..1120862 (+)	981	WP_338712406.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35693.57 Da
• Isoelectric Point: 5.2616

>NTDB_id=945286 WAA16_RS05435 WP_034663299.1 1115057..1116019(+) (med) [Bacillus pumilus strain S9]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYTIIAKKFNEGKLNEQGDYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIATYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=945286 WAA16_RS05435 WP_034663299.1 1115057..1116019(+) (med) [Bacillus pumilus strain S9]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTCGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCGGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTATATCCAGCAG
GCGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACTGATCAATCC
AACCTCGGCAGTCATACCGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACACTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAACGAACAAGGTGACTACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGATATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.537	97.813	0.631