Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   ACFXAC_RS00435 Genome accession   NZ_CP170720
Coordinates   77026..78108 (+) Length   360 a.a.
NCBI ID   WP_007410390.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain JP5006     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 72026..83108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFXAC_RS00420 (ACFXAC_00420) - 72026..73117 (+) 1092 WP_003156398.1 protein arginine kinase -
  ACFXAC_RS00425 (ACFXAC_00425) clpC 73114..75549 (+) 2436 WP_053573807.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  ACFXAC_RS00430 (ACFXAC_00430) radA/sms 75643..77022 (+) 1380 WP_014304212.1 DNA repair protein RadA Machinery gene
  ACFXAC_RS00435 (ACFXAC_00435) disA 77026..78108 (+) 1083 WP_007410390.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  ACFXAC_RS00440 (ACFXAC_00440) - 78222..79322 (+) 1101 WP_003156403.1 PIN/TRAM domain-containing protein -
  ACFXAC_RS00445 (ACFXAC_00445) ispD 79335..80033 (+) 699 WP_015239038.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  ACFXAC_RS00450 (ACFXAC_00450) ispF 80026..80502 (+) 477 WP_003156407.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  ACFXAC_RS00455 (ACFXAC_00455) gltX 80594..82045 (+) 1452 WP_053573808.1 glutamate--tRNA ligase -
  ACFXAC_RS00460 (ACFXAC_00460) cysE 82356..83009 (+) 654 WP_007410393.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40671.26 Da        Isoelectric Point: 5.7630

>NTDB_id=945274 ACFXAC_RS00435 WP_007410390.1 77026..78108(+) (disA) [Bacillus amyloliquefaciens strain JP5006]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATVEELDDVEGIGEVRAKKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=945274 ACFXAC_RS00435 WP_007410390.1 77026..78108(+) (disA) [Bacillus amyloliquefaciens strain JP5006]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATTCTGCAGTTCGTTGCACCGGGCACCCCGCT
CAGAGCCGGGATAGAGAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAATGATAAGGTAAAGCAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGTGCCATT
ATTCTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAAGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTCATCGCCATTTCTGAGCGCAGAAATG
TCATTACGTTATATCAGGACAGCATGAAGTACACACTAAAGGACATAGGTTTTATTTTAACAAAGGCAAATCAGGCCATT
CAAACGCTCGAGAAGTATAAAACCATTTTAGACAAAACGATTACGGCTTTAAACGCATTAGAGTTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCATCGATATGAAATGGTGCTCCGAATAAAAAATGAAATCAATATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGACATGGAAGAAGAGGCGGCACTTTTC
ATCAAAGACTATGTCAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATCT
GCTTGATGACTCCATTCTGTTTAAGCTGCTTGGATATCCGGCTTCTACCAATCTTGATGATTATGTGCTCCCGAGAGGAT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCGTTCGGATTTTTGCCAAGC
ATAACGGAAGCCACTGTAGAAGAGCTTGATGATGTCGAAGGTATCGGCGAAGTGCGCGCCAAAAAAATCAAAAAAGGCTT
AAAACGCCTTCAGGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.167

100

0.942