Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ACFXAD_RS00780 Genome accession   NZ_CP170653
Coordinates   129177..130004 (-) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain JP5011     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 124177..135004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFXAD_RS00755 (ACFXAD_00755) abrB 126517..126807 (+) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator
  ACFXAD_RS00760 (ACFXAD_00760) rsmI 126857..127738 (-) 882 WP_053573815.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACFXAD_RS00765 (ACFXAD_00765) - 127713..128012 (-) 300 WP_007409921.1 GIY-YIG nuclease family protein -
  ACFXAD_RS00770 (ACFXAD_00770) - 127999..128742 (-) 744 WP_004264717.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ACFXAD_RS00775 (ACFXAD_00775) yabA 128803..129162 (-) 360 WP_004264720.1 replication initiation-control protein YabA -
  ACFXAD_RS00780 (ACFXAD_00780) yaaT 129177..130004 (-) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  ACFXAD_RS00785 (ACFXAD_00785) holB 130007..130996 (-) 990 WP_007409919.1 DNA polymerase III subunit delta' -
  ACFXAD_RS00790 (ACFXAD_00790) - 131008..131448 (-) 441 WP_004264730.1 YaaR family protein -
  ACFXAD_RS00795 (ACFXAD_00795) darA 131461..131790 (-) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  ACFXAD_RS00800 (ACFXAD_00800) tmk 131861..132499 (-) 639 WP_007409918.1 dTMP kinase -
  ACFXAD_RS00805 (ACFXAD_00805) - 132496..133929 (-) 1434 WP_053573814.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=944825 ACFXAD_RS00780 WP_004264723.1 129177..130004(-) (yaaT) [Bacillus amyloliquefaciens strain JP5011]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=944825 ACFXAD_RS00780 WP_004264723.1 129177..130004(-) (yaaT) [Bacillus amyloliquefaciens strain JP5011]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGGAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAGTT
TACATTTGACCGCAATAAAGTTATTTTTTACTTTACAGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGACGAGGCGAAAATGCTCGGCGGTATCGGGCCC
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967