Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ACFW99_RS08540 Genome accession   NZ_CP170651
Coordinates   1694880..1696148 (+) Length   422 a.a.
NCBI ID   WP_015417482.1    Uniprot ID   A7Z4S7
Organism   Bacillus amyloliquefaciens strain JP5025     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1689880..1701148
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFW99_RS08515 (ACFW99_08515) pyrH 1690675..1691397 (+) 723 WP_003154213.1 UMP kinase -
  ACFW99_RS08520 (ACFW99_08520) frr 1691400..1691957 (+) 558 WP_003154212.1 ribosome recycling factor -
  ACFW99_RS08525 (ACFW99_08525) - 1692083..1692865 (+) 783 WP_007611457.1 isoprenyl transferase -
  ACFW99_RS08530 (ACFW99_08530) - 1692869..1693666 (+) 798 WP_007409796.1 phosphatidate cytidylyltransferase -
  ACFW99_RS08535 (ACFW99_08535) dxr 1693722..1694873 (+) 1152 WP_015417481.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  ACFW99_RS08540 (ACFW99_08540) eeP 1694880..1696148 (+) 1269 WP_015417482.1 RIP metalloprotease RseP Regulator
  ACFW99_RS08545 (ACFW99_08545) proS 1696180..1697874 (+) 1695 WP_031379116.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46515.44 Da        Isoelectric Point: 6.1739

>NTDB_id=944737 ACFW99_RS08540 WP_015417482.1 1694880..1696148(+) (eeP) [Bacillus amyloliquefaciens strain JP5025]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMMSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=944737 ACFW99_RS08540 WP_015417482.1 1694880..1696148(+) (eeP) [Bacillus amyloliquefaciens strain JP5025]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTCGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGCGGGTTCGTCCGCATGGCCGGTGAAGACCCGGAGATGATTGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATATCC
CGACGCTTTAATTATCGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCGGGCTTTACTGTCAGTCAGACCTCTTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAACCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATAATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTTGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGGAAGCTGACAGACAATGGAC
GCGCAGCGGCTGCCGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGATGTCATGGACCGACATC
GTGACAGCGGTAAAAGAAAATCCCGGAAAAAAAATCGATGTCGCCGTCAAACGGGACGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATTGCCTATGGCGCGACATCTACCGTTGATGTCACAAAAGCGATTCTGACCAATCTGAGCAAACTTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGTCCTGTCGGCATTTATGATATGACGGATCAAGTTGCAAAAACCGGTATTAT
CAACCTATTCCAGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATTGTCAACCTGCTGCCGATACCGGCGCTTGACGGCG
GGCGGCTGCTGTTTTTATTCATTGAAGCAATCCGCGGCAAGCCGATAAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-408)

PDZ domain (PDZ_6)

(212-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z4S7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.535

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.671

100

0.4