Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACFMSI_RS13810 Genome accession   NZ_CP170579
Coordinates   2813834..2814679 (-) Length   281 a.a.
NCBI ID   WP_001825659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JB2E56     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2808834..2819679
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFMSI_RS13765 (ACFMSI_13765) - 2809089..2809365 (+) 277 Protein_2670 site-specific integrase -
  ACFMSI_RS13770 (ACFMSI_13770) - 2809358..2809585 (+) 228 Protein_2671 Abi family protein -
  ACFMSI_RS13775 (ACFMSI_13775) rpsR 2809822..2810064 (-) 243 WP_000897044.1 30S ribosomal protein S18 -
  ACFMSI_RS13780 (ACFMSI_13780) ssbA 2810116..2810619 (-) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  ACFMSI_RS13785 (ACFMSI_13785) rpsF 2810640..2810936 (-) 297 WP_001261460.1 30S ribosomal protein S6 -
  ACFMSI_RS13790 (ACFMSI_13790) - 2811180..2811371 (+) 192 WP_001052481.1 hypothetical protein -
  ACFMSI_RS13795 (ACFMSI_13795) ychF 2811457..2812554 (-) 1098 WP_381543568.1 redox-regulated ATPase YchF -
  ACFMSI_RS13800 (ACFMSI_13800) - 2812566..2812769 (-) 204 WP_000157348.1 DUF951 domain-containing protein -
  ACFMSI_RS13805 (ACFMSI_13805) - 2812799..2813680 (-) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  ACFMSI_RS13810 (ACFMSI_13810) spo0J 2813834..2814679 (-) 846 WP_001825659.1 ParB/RepB/Spo0J family partition protein Regulator
  ACFMSI_RS13815 (ACFMSI_13815) - 2815343..2816446 (+) 1104 WP_000655690.1 PLP-dependent transferase -
  ACFMSI_RS13820 (ACFMSI_13820) metC 2816443..2817603 (+) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  ACFMSI_RS13825 (ACFMSI_13825) - 2817572..2819413 (+) 1842 WP_000077325.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -

Sequence


Protein


Download         Length: 281 a.a.        Molecular weight: 32797.86 Da        Isoelectric Point: 10.0554

>NTDB_id=944669 ACFMSI_RS13810 WP_001825659.1 2813834..2814679(-) (spo0J) [Staphylococcus aureus strain JB2E56]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=944669 ACFMSI_RS13810 WP_001825659.1 2813834..2814679(-) (spo0J) [Staphylococcus aureus strain JB2E56]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381