Detailed information NTG0944631

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: V9K81_RS03500
• Genome accession: NZ_CP146841
• Coordinates: 763350..764216 (-)
• Length: 288 a.a.
• NCBI ID: WP_338799281.1
• Uniprot ID: -
• Organism: Pseudomonas monteilii strain L2757hy
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 758350..769216

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9K81_RS03465 (V9K81_03465)	-	758880..760175 (-)	1296	WP_016713389.1	NAD(P)/FAD-dependent oxidoreductase	-
V9K81_RS03470 (V9K81_03470)	-	760260..760433 (-)	174	WP_013970765.1	DUF3094 family protein	-
V9K81_RS03475 (V9K81_03475)	-	760566..761195 (-)	630	WP_013970766.1	DUF1780 domain-containing protein	-
V9K81_RS03480 (V9K81_03480)	-	761251..761682 (-)	432	WP_028699901.1	hypothetical protein	-
V9K81_RS03485 (V9K81_03485)	-	761769..762476 (+)	708	WP_019097626.1	energy-coupling factor ABC transporter permease	-
V9K81_RS03490 (V9K81_03490)	yacG	762530..762730 (-)	201	WP_016484797.1	DNA gyrase inhibitor YacG	-
V9K81_RS03495 (V9K81_03495)	coaE	762727..763350 (-)	624	WP_016713386.1	dephospho-CoA kinase	-
V9K81_RS03500 (V9K81_03500)	pilD	763350..764216 (-)	867	WP_338799281.1	A24 family peptidase	Machinery gene
V9K81_RS03505 (V9K81_03505)	-	764219..765427 (-)	1209	WP_028699903.1	type II secretion system F family protein	-
V9K81_RS03510 (V9K81_03510)	-	765645..766055 (+)	411	WP_019097784.1	pilin	-
V9K81_RS03520 (V9K81_03520)	-	766367..767695 (+)	1329	WP_338799285.1	integrase arm-type DNA-binding domain-containing protein	-

Sequence

Protein

• Length: 288 a.a.
• Molecular weight: 31949.24 Da
• Isoelectric Point: 7.5984

>NTDB_id=944631 V9K81_RS03500 WP_338799281.1 763350..764216(-) (pilD) [Pseudomonas monteilii strain L2757hy]
MTLWTLLAEQPAYFLTLATLLGLLVGSFLNVLVYRLPIMLERQWQREAQEVLGLPVTQHERFDLCLPASRCPHCAHQIRA
WENIPVISYLALRGRCSACKTRISPRYPMVEIASALLSLVVAWRFGASVEALLALPLTWCLLALSLIDAEHQLLPDVLVL
PMLWLGLIVNAFNLYAPLTDALLGAVAGYLSLWTVYWVFKLVTGKEGMGYGDFKLMALIGAWGGWQVLPLTLLLSSVVGA
LVGLCLLRLRRHAMGTAMPFGPYLVIAGWIAVLWGDEIVASYMQLLGY

Nucleotide

• Length: 867 bp

>NTDB_id=944631 V9K81_RS03500 WP_338799281.1 763350..764216(-) (pilD) [Pseudomonas monteilii strain L2757hy]
ATGACTTTATGGACTTTGCTGGCAGAGCAGCCGGCGTACTTCCTCACCCTGGCCACGCTGCTCGGCCTGTTGGTGGGCAG
TTTTCTCAATGTGCTGGTGTATCGGCTGCCGATCATGCTGGAGCGGCAATGGCAGCGTGAGGCACAAGAAGTGTTGGGGT
TGCCGGTTACGCAGCACGAACGGTTCGACCTGTGCCTGCCCGCCTCCCGCTGCCCACATTGCGCGCATCAGATTCGCGCG
TGGGAGAACATTCCGGTTATCAGTTACCTGGCATTGCGCGGGCGTTGCTCAGCCTGCAAAACCCGTATCAGCCCGCGCTA
CCCGATGGTGGAAATCGCCAGCGCGCTGCTGTCGCTGGTGGTGGCGTGGCGTTTTGGCGCTTCGGTAGAGGCGTTGCTGG
CACTGCCACTGACCTGGTGCCTGCTGGCCCTGAGCCTGATCGATGCAGAACACCAATTGCTGCCGGATGTGCTGGTGCTG
CCGATGCTGTGGCTGGGGCTGATCGTCAATGCCTTCAACCTGTACGCCCCGCTAACCGACGCGCTGTTGGGCGCGGTGGC
CGGGTACCTCAGCCTGTGGACGGTGTACTGGGTGTTCAAGCTGGTCACCGGCAAGGAAGGCATGGGCTATGGCGACTTCA
AGCTGATGGCGCTGATCGGGGCCTGGGGTGGCTGGCAGGTGTTGCCGCTGACGTTGTTGCTGTCATCGGTGGTGGGGGCG
CTGGTTGGCCTGTGCCTGCTGCGTTTGCGCAGGCATGCCATGGGCACGGCGATGCCGTTCGGGCCTTATCTGGTGATTGC
GGGGTGGATTGCCGTGCTCTGGGGTGATGAAATAGTCGCCTCTTACATGCAACTGCTTGGATACTGA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (20-125)

• Type IV leader peptidase family (Peptidase_A24) (137-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	53.069	96.181	0.51
pilD	Acinetobacter baumannii D1279779	50.534	97.569	0.493
pilD	Acinetobacter nosocomialis M2	51.128	92.361	0.472
pilD	Vibrio campbellii strain DS40M4	48.201	96.528	0.465
pilD	Neisseria gonorrhoeae MS11	48.881	93.056	0.455