Detailed information NTG0944553

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: V9W58_RS02010
• Genome accession: NZ_CP146764
• Coordinates: 395690..396838 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain AP202
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 390690..401838

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9W58_RS01990 (V9W58_01990)	-	391087..391770 (-)	684	WP_059366584.1	ABC transporter ATP-binding protein	-
V9W58_RS01995 (V9W58_01995)	-	391785..393221 (-)	1437	WP_251248583.1	ABC transporter permease	-
V9W58_RS02000 (V9W58_02000)	-	393434..394117 (+)	684	WP_160242544.1	response regulator transcription factor	-
V9W58_RS02005 (V9W58_02005)	-	394104..395537 (+)	1434	WP_165913860.1	HAMP domain-containing sensor histidine kinase	-
V9W58_RS02010 (V9W58_02010)	rapC	395690..396838 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
V9W58_RS02015 (V9W58_02015)	phrC	396822..396941 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
V9W58_RS02020 (V9W58_02020)	-	397090..397185 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
V9W58_RS02025 (V9W58_02025)	-	397280..398644 (-)	1365	WP_251248582.1	aspartate kinase	-
V9W58_RS02030 (V9W58_02030)	ceuB	399058..400011 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
V9W58_RS02035 (V9W58_02035)	-	400001..400948 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
V9W58_RS02040 (V9W58_02040)	-	400942..401700 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=944553 V9W58_RS02010 WP_007410270.1 395690..396838(+) (rapC) [Bacillus velezensis strain AP202]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=944553 V9W58_RS02010 WP_007410270.1 395690..396838(+) (rapC) [Bacillus velezensis strain AP202]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568