Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   V9W59_RS05320 Genome accession   NZ_CP146762
Coordinates   1099511..1100461 (+) Length   316 a.a.
NCBI ID   WP_335343568.1    Uniprot ID   -
Organism   Bacillus safensis strain JJ1041     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1094511..1105461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W59_RS05295 (V9W59_05295) comK 1094860..1095438 (+) 579 WP_024425481.1 competence protein ComK Regulator
  V9W59_RS05300 (V9W59_05300) - 1095738..1096220 (+) 483 WP_024425482.1 hypothetical protein -
  V9W59_RS05305 (V9W59_05305) - 1096251..1097690 (-) 1440 WP_149125797.1 PLP-dependent aminotransferase family protein -
  V9W59_RS05310 (V9W59_05310) - 1097836..1099005 (+) 1170 WP_024425484.1 MFS transporter -
  V9W59_RS05315 (V9W59_05315) - 1099071..1099349 (+) 279 WP_171464240.1 barstar family protein -
  V9W59_RS05320 (V9W59_05320) ceuB 1099511..1100461 (+) 951 WP_335343568.1 ABC transporter permease Machinery gene
  V9W59_RS05325 (V9W59_05325) - 1100454..1101404 (+) 951 WP_171464128.1 iron chelate uptake ABC transporter family permease subunit -
  V9W59_RS05330 (V9W59_05330) - 1101395..1102153 (+) 759 WP_024425488.1 ATP-binding cassette domain-containing protein -
  V9W59_RS05335 (V9W59_05335) - 1102175..1103119 (+) 945 WP_034621816.1 siderophore ABC transporter substrate-binding protein -
  V9W59_RS05340 (V9W59_05340) - 1103258..1104211 (+) 954 WP_197172758.1 LCP family protein -
  V9W59_RS05345 (V9W59_05345) - 1104283..1104645 (-) 363 WP_024425491.1 hypothetical protein -
  V9W59_RS05350 (V9W59_05350) - 1104803..1105420 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34916.30 Da        Isoelectric Point: 9.7476

>NTDB_id=944421 V9W59_RS05320 WP_335343568.1 1099511..1100461(+) (ceuB) [Bacillus safensis strain JJ1041]
MKLYQLSLLFVCLACISLFVGVQDLSILQLFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGVLVAMLVFTHVNPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKGLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=944421 V9W59_RS05320 WP_335343568.1 1099511..1100461(+) (ceuB) [Bacillus safensis strain JJ1041]
ATGAAATTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTGTTTTAGTAGCAATGCTTGTTTTTACACATGTGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATTAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGTGAGAGCTTTGCCGTTAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGAATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAAGGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GACTCATGGTAGGCATCATCGGAAGTGCGATCTTCCTGTATATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.831

95.253

0.484