Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   V9W61_RS11185 Genome accession   NZ_CP146761
Coordinates   2205057..2205860 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain JJ1138     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2200057..2210860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W61_RS11170 (V9W61_11170) - 2202273..2202509 (+) 237 WP_327862417.1 DUF2627 domain-containing protein -
  V9W61_RS11175 (V9W61_11175) - 2202543..2203280 (-) 738 WP_024718886.1 glycerophosphodiester phosphodiesterase -
  V9W61_RS11180 (V9W61_11180) - 2203507..2204607 (-) 1101 WP_024718885.1 Rap family tetratricopeptide repeat protein -
  V9W61_RS11185 (V9W61_11185) spo0A 2205057..2205860 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  V9W61_RS11190 (V9W61_11190) spoIVB 2206144..2207421 (-) 1278 WP_007501161.1 SpoIVB peptidase -
  V9W61_RS11195 (V9W61_11195) recN 2207620..2209353 (-) 1734 WP_335350754.1 DNA repair protein RecN Machinery gene
  V9W61_RS11200 (V9W61_11200) argR 2209388..2209837 (-) 450 WP_007501163.1 transcriptional regulator ArgR -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=944380 V9W61_RS11185 WP_008342226.1 2205057..2205860(-) (spo0A) [Bacillus altitudinis strain JJ1138]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=944380 V9W61_RS11185 WP_008342226.1 2205057..2205860(-) (spo0A) [Bacillus altitudinis strain JJ1138]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCAATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTGTTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884