Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   ACFIOK_RS07770 Genome accession   NZ_CP170434
Coordinates   1527963..1529114 (-) Length   383 a.a.
NCBI ID   WP_000020363.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t315     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 1522963..1534114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOK_RS07750 - 1523359..1524156 (-) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -
  ACFIOK_RS07755 - 1524330..1524545 (+) 216 WP_000026308.1 hypothetical protein -
  ACFIOK_RS07760 rny 1524842..1526401 (-) 1560 WP_001050913.1 ribonuclease Y -
  ACFIOK_RS07765 recA 1526755..1527798 (-) 1044 WP_000368166.1 recombinase RecA Machinery gene
  ACFIOK_RS07770 cinA 1527963..1529114 (-) 1152 WP_000020363.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  ACFIOK_RS07775 pgsA 1529339..1529917 (-) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  ACFIOK_RS07780 - 1529951..1530343 (-) 393 WP_000859443.1 helix-turn-helix domain-containing protein -
  ACFIOK_RS07785 - 1530362..1531189 (-) 828 WP_000214890.1 YmfK family protein -
  ACFIOK_RS07790 ymfI 1531294..1531998 (-) 705 WP_000646234.1 elongation factor P 5-aminopentanone reductase -
  ACFIOK_RS07795 yfmH 1531998..1533284 (-) 1287 WP_000664779.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43233.53 Da        Isoelectric Point: 6.1914

>NTDB_id=944333 ACFIOK_RS07770 WP_000020363.1 1527963..1529114(-) (cinA) [Staphylococcus aureus strain t315]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENLVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=944333 ACFIOK_RS07770 WP_000020363.1 1527963..1529114(-) (cinA) [Staphylococcus aureus strain t315]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGCTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAACAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACCTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
TGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTCATAA
GATTATTAAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.146

100

0.431