Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   V9W63_RS02025 Genome accession   NZ_CP146760
Coordinates   398987..399940 (+) Length   317 a.a.
NCBI ID   WP_059366593.1    Uniprot ID   -
Organism   Bacillus velezensis strain JJ334     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 393987..404940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W63_RS02000 (V9W63_02000) - 394034..395467 (+) 1434 WP_165913860.1 HAMP domain-containing sensor histidine kinase -
  V9W63_RS02005 (V9W63_02005) rapC 395620..396768 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  V9W63_RS02010 (V9W63_02010) phrC 396752..396871 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  V9W63_RS02015 (V9W63_02015) - 397019..397114 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  V9W63_RS02020 (V9W63_02020) - 397209..398573 (-) 1365 WP_095352403.1 aspartate kinase -
  V9W63_RS02025 (V9W63_02025) ceuB 398987..399940 (+) 954 WP_059366593.1 ABC transporter permease Machinery gene
  V9W63_RS02030 (V9W63_02030) - 399930..400877 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  V9W63_RS02035 (V9W63_02035) - 400871..401629 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  V9W63_RS02040 (V9W63_02040) - 401651..402595 (+) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  V9W63_RS02045 (V9W63_02045) - 402637..404061 (-) 1425 WP_007410276.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=944282 V9W63_RS02025 WP_059366593.1 398987..399940(+) (ceuB) [Bacillus velezensis strain JJ334]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=944282 V9W63_RS02025 WP_059366593.1 398987..399940(+) (ceuB) [Bacillus velezensis strain JJ334]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATTCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTTTTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGAGTGATTATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536