Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   V9W60_RS14935 Genome accession   NZ_CP146759
Coordinates   2881840..2884152 (-) Length   770 a.a.
NCBI ID   WP_058336868.1    Uniprot ID   -
Organism   Bacillus altitudinis strain JJ61     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2876840..2889152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V9W60_RS14895 (V9W60_14895) - 2877246..2877677 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  V9W60_RS14900 (V9W60_14900) - 2877677..2878018 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  V9W60_RS14905 (V9W60_14905) - 2878011..2879489 (+) 1479 WP_058336867.1 Na+/H+ antiporter subunit D -
  V9W60_RS14910 (V9W60_14910) - 2879496..2879975 (+) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  V9W60_RS14915 (V9W60_14915) - 2879975..2880256 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  V9W60_RS14920 (V9W60_14920) mnhG 2880240..2880614 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  V9W60_RS14925 (V9W60_14925) - 2880705..2881094 (-) 390 WP_017358943.1 hotdog fold thioesterase -
  V9W60_RS14930 (V9W60_14930) comA 2881118..2881759 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  V9W60_RS14935 (V9W60_14935) comP 2881840..2884152 (-) 2313 WP_058336868.1 ATP-binding protein Regulator
  V9W60_RS14940 (V9W60_14940) comX 2884206..2884376 (-) 171 WP_074041927.1 competence pheromone ComX -
  V9W60_RS14945 (V9W60_14945) - 2884373..2885287 (-) 915 WP_035701208.1 polyprenyl synthetase family protein -
  V9W60_RS14950 (V9W60_14950) degQ 2885439..2885579 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  V9W60_RS14955 (V9W60_14955) - 2886085..2886438 (+) 354 WP_338704229.1 inner spore coat protein -
  V9W60_RS14960 (V9W60_14960) - 2886475..2887701 (-) 1227 WP_035701209.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89578.19 Da        Isoelectric Point: 7.3068

>NTDB_id=944257 V9W60_RS14935 WP_058336868.1 2881840..2884152(-) (comP) [Bacillus altitudinis strain JJ61]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYIIPLILYSICLFCIFFIIRINKEVQRKSAFLLVLFLLTICIGY
LSAGTSGIGDRFSHYVITFCLSSVFIFYIHFIYQYFKEFDLHITTRKTIYILYSLPITNLVIELFVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMQKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFLAITPTILVVVTFYILQKPEDLKYTLKLAFITYTLMLAVFYFKEILDFRFRLKRFSEKY
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKANGEMIEIDESTNDSKLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFMICCLSNIQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDD
GVGFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=944257 V9W60_RS14935 WP_058336868.1 2881840..2884152(-) (comP) [Bacillus altitudinis strain JJ61]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTGGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTTGCGGAGAACAAGAATGGTCAAGCAGAAGTTGTCAAAGTCGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATTAATGGAGAACCTGCTAACAATAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATATAATTCCTCTCATCCTGTATTCAATATGTTTATTTTGTATCTTCTTTA
TCATTCGTATTAACAAAGAGGTCCAACGAAAATCAGCATTTCTTTTAGTTTTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCGGGTATTGGTGATAGATTTAGCCATTATGTCATCACATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATAACGACTCGAAAAACAATTTATATTTTATATA
GTCTTCCTATAACTAATCTAGTAATAGAGCTGTTTGTTCCAATTGATTCGGCGATAGCCAGATACATGCCGAGTTTAAAT
CTTTTATTCTTTTTTGCTTCTATTATCATGTCATTCAAAGTCATTATTAATGGAATGCAGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATTAATATCATAGCATTTTGTCCGTTTATATTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTTGTAGATCCCTTTTTCTTAACTTCTTTTGTATTGCTCATTCCTTTTTCACTCGTGTATCAA
TTCATGACGAACAAACTTTACAATATGGATTTCTTGATTAGTAGACTTAAATACTATGGATTTCTTGCCATTACACCGAC
CATTTTAGTTGTTGTCACGTTTTATATTCTGCAAAAACCAGAAGATTTAAAGTACACACTGAAGCTCGCATTCATCACAT
ATACACTCATGTTGGCTGTTTTCTATTTTAAAGAAATTTTAGATTTCCGTTTTCGTTTGAAACGTTTTTCAGAGAAGTAT
AATTACCAAGACAGCGTGTTTAAATTTACGCAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTACTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTCGTTGTGAATAAAGCCTTTGTGCTAGAGGTGAAGGCTAATGGAGAAATGATTGAAATTG
ATGAATCAACAAATGATAGTAAGTTATGGAAAGAATACGTGGATCAATTTCAAGATATTTTAGGTGAAGTTGGGAAAATC
ATCGAGCTTGATAAAGGGTTTATGATGAAAATTGGAGAGCGGGGCGGTCACTCGTTTATGATTTGCTGCTTATCCAATAT
ACAGACGCCGAAATTGACCCGCGATGAAATTTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATG
TTGTCAAGATCGAAGAACTGATGGAGCATCTTGAGGATTTGAAGCAGCGGGAAGCCAATCCTGCCTGGCTGAAGAAAGTC
ATGTTCGCCATGGAAGAAAAGCAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCTGTGCTGCAGGATTTGATTTCACT
GAAGAGACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCATTGATCTCAT
GGAATGAACAAATGTCTAAGGTGATTCAAACCACTAGAGAAACATGTCATGAACTTCGGCCGCAGCTCCTCTATGATTTG
GGGTTAGTGAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGACTGAATACAACCCG
CTTTGATAAAGAACTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATTGTGCAGGAGCTGTTATCCAATGCGT
TGAAGCATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGAT
GGAGTCGGATTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGC
TCTAAATGGAAAGCTTCAAATTCACACAGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.774

100

0.491