Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   V7A39_RS09740 Genome accession   NZ_CP146749
Coordinates   1909681..1910928 (-) Length   415 a.a.
NCBI ID   WP_003133508.1    Uniprot ID   -
Organism   Lactococcus petauri strain L3     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1904681..1915928
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V7A39_RS09730 (V7A39_09730) - 1906283..1907098 (-) 816 Protein_1896 PolC-type DNA polymerase III N-terminal domain-containing protein -
  V7A39_RS09735 (V7A39_09735) - 1907804..1909654 (-) 1851 WP_003133504.1 proline--tRNA ligase -
  V7A39_RS09740 (V7A39_09740) eeP 1909681..1910928 (-) 1248 WP_003133508.1 RIP metalloprotease RseP Regulator
  V7A39_RS09745 (V7A39_09745) - 1911104..1911898 (-) 795 WP_003133509.1 phosphatidate cytidylyltransferase -
  V7A39_RS09750 (V7A39_09750) - 1911895..1912632 (-) 738 WP_003133511.1 isoprenyl transferase -
  V7A39_RS09755 (V7A39_09755) yajC 1912833..1913168 (-) 336 WP_003133513.1 preprotein translocase subunit YajC -
  V7A39_RS09760 (V7A39_09760) - 1913243..1913890 (-) 648 WP_003133514.1 DNA alkylation repair protein -
  V7A39_RS09765 (V7A39_09765) rlmH 1913887..1914366 (-) 480 WP_003133515.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V7A39_RS09770 (V7A39_09770) htrA 1914670..1915887 (+) 1218 WP_003133516.1 S1C family serine protease Regulator

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45065.51 Da        Isoelectric Point: 5.8048

>NTDB_id=944116 V7A39_RS09740 WP_003133508.1 1909681..1910928(-) (eeP) [Lactococcus petauri strain L3]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLVIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGEIKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQPKDKIQAVNGEKTGNWQEVVQ
RISANDGSEIKLDIERDGASKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANAATLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLLSIIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=944116 V7A39_RS09740 WP_003133508.1 1909681..1910928(-) (eeP) [Lactococcus petauri strain L3]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAATATGGTCATCTGTTCTTTGC
CAAACGCGCGGGGATTTTAGTTCGCGAGTTTTCCATTGGAATGGGGCCCAAAATTTTTGCACATCAAGCCAAAGATGGCA
CATTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTACGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGGACCCCGGCATCTTTGGTGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAACGGGTAACTTTGGAAAA
CAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCTCTTTTCATTGAAGGAGAAGTTTTTGGTGAAATAAAAC
GTTATTCAGTTGACCATGACGCAACAATTATTGAAGCTGATGGAACGGAACTTCGTATCGCTCCACGAGATGTACAATAT
CAAAGTGCTAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGCCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATCATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTGCAATCGGGTACCCCTGCTT
ATTCGGCAGGTTTACAGCCAAAAGATAAAATCCAAGCAGTCAATGGCGAAAAAACGGGCAACTGGCAAGAAGTTGTCCAA
CGGATTAGTGCAAATGACGGCAGTGAAATCAAGCTGGATATTGAACGGGATGGCGCATCAAAGACACTAGAGCTCAAACC
AGAAAAAATTGACGGAAGATATCGCATTGGTATCACTCAGACAATTAAAACGGGCTTTTTAGATAAACTAACGGGTGGCT
TTACCCAAGCTGCTAACGCAGCCACACTGATATTTAAAGCTTTAGGCAATCTTATAGCACAGCCAAGCCTTGATAAACTT
GGTGGACCTGTCGCTATTTATGATTTAAGTGGACAAGCAGCCCGAGAAGGACTATTATCCATCATCGCTTTACTTGCCAT
GCTCTCAATCAATCTGGGAATCGTCAATTTAATCCCAATTCCCGTCCTTGACGGAGGGAAAATCGTCCTCAATATTGTTG
AGGCCTTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATTTTAACACTTGTGGGTCTTGTCTTTATGGTGGTTCTG
ATGATTGCTGTGACTTGGAATGATATTCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(7-400)

(204-256)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.325

100

0.569

  eeP Streptococcus thermophilus LMD-9

56.086

100

0.566