Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   V7A41_RS09055 Genome accession   NZ_CP146746
Coordinates   1815970..1817217 (-) Length   415 a.a.
NCBI ID   WP_153925433.1    Uniprot ID   -
Organism   Lactococcus petauri strain L4     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1810970..1822217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V7A41_RS09040 (V7A41_09040) - 1812501..1813145 (-) 645 Protein_1752 PolC-type DNA polymerase III N-terminal domain-containing protein -
  V7A41_RS09045 (V7A41_09045) - 1813251..1813625 (-) 375 WP_019291560.1 hypothetical protein -
  V7A41_RS09050 (V7A41_09050) - 1814093..1815943 (-) 1851 WP_153925430.1 proline--tRNA ligase -
  V7A41_RS09055 (V7A41_09055) eeP 1815970..1817217 (-) 1248 WP_153925433.1 RIP metalloprotease RseP Regulator
  V7A41_RS09060 (V7A41_09060) - 1817394..1818188 (-) 795 WP_019291563.1 phosphatidate cytidylyltransferase -
  V7A41_RS09065 (V7A41_09065) - 1818185..1818922 (-) 738 WP_019291564.1 isoprenyl transferase -
  V7A41_RS09070 (V7A41_09070) yajC 1819122..1819457 (-) 336 WP_014025468.1 preprotein translocase subunit YajC -
  V7A41_RS09075 (V7A41_09075) - 1819532..1820179 (-) 648 WP_341785129.1 DNA alkylation repair protein -
  V7A41_RS09080 (V7A41_09080) rlmH 1820176..1820655 (-) 480 WP_153925439.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V7A41_RS09085 (V7A41_09085) htrA 1820959..1822176 (+) 1218 WP_019291567.1 S1C family serine protease Regulator

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45089.51 Da        Isoelectric Point: 5.8072

>NTDB_id=944071 V7A41_RS09055 WP_153925433.1 1815970..1817217(-) (eeP) [Lactococcus petauri strain L4]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYIRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGETKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQSKDKIQAVNGEKTNNWEEVVQ
RIGANDGSEIKLDIERAGATKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANATTLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLVSVIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=944071 V7A41_RS09055 WP_153925433.1 1815970..1817217(-) (eeP) [Lactococcus petauri strain L4]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAGTATGGTCATCTATTCTTTGC
TAAGCGCGCGGGGATTTTAGTCCGCGAGTTTTCCATTGGAATGGGCCCCAAAATTTTTGCACATCAAGCCAAAGATGGCA
CGTTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATATCCGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGAACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAGCGGGTGACTTTGGAAAA
TAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCACTTTTCATCGAAGGAGAAGTTTTTGGTGAAACAAAAC
GTTATTCAGTTGACCATGATGCAACAATTATCGAAGCGGATGGCACGGAACTTCGTATCGCTCCACGCGACGTACAATAT
CAAAGTGCCAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGTCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTCCAATCTGGCACCCCTGCTT
ATTCGGCAGGTTTACAGTCAAAGGATAAAATCCAAGCAGTCAATGGTGAAAAAACCAATAACTGGGAAGAAGTTGTCCAA
AGGATCGGTGCAAATGATGGCAGTGAAATCAAGCTGGATATCGAACGTGCAGGTGCGACGAAGACACTGGAGCTCAAGCC
AGAAAAAATTGACGGAAGATACCGCATTGGTATCACTCAAACAATCAAAACTGGCTTTTTAGATAAGCTAACGGGTGGCT
TTACTCAGGCTGCTAACGCAACAACGTTGATATTTAAAGCTTTAGGTAACCTCATTGCACAGCCAAGTCTTGATAAACTT
GGTGGACCCGTTGCCATTTATGATTTAAGTGGGCAAGCAGCCCGAGAAGGTCTAGTATCTGTTATCGCTTTACTTGCCAT
GCTCTCAATTAATCTGGGAATCGTAAATTTAATCCCAATCCCCGTCCTTGACGGAGGGAAAATTGTCCTCAATATTGTTG
AGGCCCTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATCTTAACACTTGTTGGTCTTGTCTTTATGGTGGTCTTG
ATGATTGCTGTGACTTGGAATGATATCCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(204-256)

(7-400)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

55.847

100

0.564

  eeP Streptococcus thermophilus LMD-9

55.609

100

0.561