Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   V7A38_RS09225 Genome accession   NZ_CP146739
Coordinates   1806957..1808204 (-) Length   415 a.a.
NCBI ID   WP_014025467.1    Uniprot ID   A0AA43PEA3
Organism   Lactococcus garvieae strain L7     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1801957..1813204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V7A38_RS09210 (V7A38_09210) - 1803550..1804371 (-) 822 Protein_1777 PolC-type DNA polymerase III N-terminal domain-containing protein -
  V7A38_RS09215 (V7A38_09215) - 1804509..1804640 (-) 132 WP_269146560.1 hypothetical protein -
  V7A38_RS09220 (V7A38_09220) - 1805080..1806930 (-) 1851 WP_003133504.1 proline--tRNA ligase -
  V7A38_RS09225 (V7A38_09225) eeP 1806957..1808204 (-) 1248 WP_014025467.1 RIP metalloprotease RseP Regulator
  V7A38_RS09230 (V7A38_09230) - 1808380..1809174 (-) 795 WP_003133509.1 phosphatidate cytidylyltransferase -
  V7A38_RS09235 (V7A38_09235) - 1809171..1809908 (-) 738 WP_003133511.1 isoprenyl transferase -
  V7A38_RS09240 (V7A38_09240) yajC 1810109..1810444 (-) 336 WP_014025468.1 preprotein translocase subunit YajC -
  V7A38_RS09245 (V7A38_09245) - 1810519..1811166 (-) 648 WP_014025469.1 DNA alkylation repair protein -
  V7A38_RS09250 (V7A38_09250) rlmH 1811163..1811642 (-) 480 WP_003133515.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V7A38_RS09255 (V7A38_09255) htrA 1811946..1813163 (+) 1218 WP_003133516.1 S1C family serine protease Regulator

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45097.57 Da        Isoelectric Point: 5.8048

>NTDB_id=943939 V7A38_RS09225 WP_014025467.1 1806957..1808204(-) (eeP) [Lactococcus garvieae strain L7]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGEIKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQPKDKIQAVNGEKTGNWQEVVQ
RISANDGSEIKLDIERDGASKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANAATLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLLSIIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=943939 V7A38_RS09225 WP_014025467.1 1806957..1808204(-) (eeP) [Lactococcus garvieae strain L7]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAATATGGTCATCTGTTCTTTGC
CAAACGCGCGGGGATTTTAGTTCGCGAGTTTTCCATTGGAATGGGCCCCAAAATTTTTGCACATCAAGCCAAAGATGGCA
CATTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTACGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGGACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAACGGGTAACTTTGGAAAA
CAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCTCTTTTCATTGAAGGGGAAGTTTTTGGTGAAATAAAAC
GTTATTCAGTTGACCATGACGCAACAATTATTGAAGCTGATGGAACGGAACTTCGTATTGCTCCACGAGATGTACAATAT
CAAAGTGCTAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGTCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTGCAATCGGGTACCCCTGCTT
ATTCGGCAGGTTTACAGCCAAAAGATAAAATCCAAGCAGTCAATGGCGAAAAAACGGGCAACTGGCAAGAAGTTGTCCAA
AGGATTAGTGCAAATGACGGCAGTGAAATCAAGCTGGATATTGAACGGGATGGCGCATCAAAGACACTAGAGCTCAAACC
AGAAAAAATTGACGGAAGATATCGCATTGGTATCACTCAGACAATTAAAACGGGCTTTTTAGATAAACTAACGGGTGGCT
TTACCCAAGCTGCTAACGCAGCCACACTGATATTTAAAGCTTTAGGCAATCTTATAGCACAGCCAAGCCTTGATAAACTT
GGTGGACCCGTCGCTATTTATGATTTAAGTGGACAAGCAGCCCGAGAAGGCCTATTATCCATCATCGCTTTACTCGCCAT
GCTCTCAATCAATCTGGGAATCGTCAATTTAATCCCAATTCCCGTCCTTGACGGAGGGAAAATTGTCCTCAATATTGTTG
AGGCCTTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATTTTAACACTTGTGGGTCTTGTCTTTATGGTGGTTCTG
ATGATTGCTGTGACTTGGAATGATATTCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(7-400)

(204-256)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.325

100

0.569

  eeP Streptococcus thermophilus LMD-9

56.086

100

0.566