Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | R8899_RS03080 | Genome accession | NZ_AP028393 |
| Coordinates | 593077..593460 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain BCH-11457 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 588077..598460
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8899_RS03060 (B11457_06030) | - | 588156..590090 (-) | 1935 | WP_002852122.1 | RNB domain-containing ribonuclease | - |
| R8899_RS03065 (B11457_06040) | ilvC | 590209..591231 (+) | 1023 | WP_002858483.1 | ketol-acid reductoisomerase | - |
| R8899_RS03070 (B11457_06050) | - | 591235..592317 (+) | 1083 | WP_002859983.1 | divergent polysaccharide deacetylase family protein | - |
| R8899_RS03075 (B11457_06060) | dprA | 592307..593080 (+) | 774 | WP_002859984.1 | DNA-processing protein DprA | Machinery gene |
| R8899_RS03080 (B11457_06070) | dprB | 593077..593460 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| R8899_RS03085 (B11457_06080) | - | 593489..594328 (+) | 840 | WP_317719104.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| R8899_RS03090 (B11457_06090) | msrA | 594503..595000 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| R8899_RS03095 (B11457_06100) | ppa | 595042..595560 (-) | 519 | WP_002852138.1 | inorganic diphosphatase | - |
| R8899_RS03100 (B11457_06110) | adk | 595570..596148 (-) | 579 | WP_002859580.1 | adenylate kinase | - |
| R8899_RS03105 (B11457_06120) | aspS | 596145..597896 (-) | 1752 | WP_032586472.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=94365 R8899_RS03080 WP_002852281.1 593077..593460(+) (dprB) [Campylobacter jejuni strain BCH-11457]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=94365 R8899_RS03080 WP_002852281.1 593077..593460(+) (dprB) [Campylobacter jejuni strain BCH-11457]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |