Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ACFIOT_RS08090 Genome accession   NZ_CP170414
Coordinates   1604254..1605540 (-) Length   428 a.a.
NCBI ID   WP_054190199.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t5047     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1599254..1610540
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOT_RS08085 - 1602531..1604234 (-) 1704 WP_054190198.1 proline--tRNA ligase -
  ACFIOT_RS08090 eeP 1604254..1605540 (-) 1287 WP_054190199.1 RIP metalloprotease RseP Regulator
  ACFIOT_RS08095 - 1605751..1606533 (-) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  ACFIOT_RS08100 - 1606540..1607310 (-) 771 WP_000473705.1 isoprenyl transferase -
  ACFIOT_RS08105 frr 1607683..1608237 (-) 555 WP_054190200.1 ribosome recycling factor -
  ACFIOT_RS08110 pyrH 1608256..1608978 (-) 723 WP_000057330.1 UMP kinase -
  ACFIOT_RS08115 tsf 1609115..1609996 (-) 882 WP_000201387.1 translation elongation factor Ts -
  ACFIOT_RS08120 - 1610031..1610144 (-) 114 WP_001789890.1 hypothetical protein -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 48171.64 Da        Isoelectric Point: 9.6510

>NTDB_id=943629 ACFIOT_RS08090 WP_054190199.1 1604254..1605540(-) (eeP) [Staphylococcus aureus strain t5047]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALNKVKDNKTTVKFERDGKIKSVELTPKKTERKLTKVSSETKYVLGFQPASERTLFKPIIFGFENFLKGSTLIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=943629 ACFIOT_RS08090 WP_054190199.1 1604254..1605540(-) (eeP) [Staphylococcus aureus strain t5047]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATCGTTTTTGGTGTACTAGTAACTGTTCACGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCGAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTACCTGTTGGTGGATACGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ACGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGCAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCAGGACCGTTATTTAACTTTATATTGGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGATTACAAAAAGGGGATAAAATTGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAAATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAATAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTGCTCGGATTCCAACCAGCTAGTGAACGTA
CGCTCTTCAAACCAATAATTTTTGGATTTGAAAACTTTTTGAAAGGTAGTACATTAATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTAGACTCAGT
TGTTAAAGCAGGTATCATTAGCTTAATTGGTTACACTGCGTTATTAAGTGTAAACTTAGGGATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTCGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATCGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(9-413)

PDZ domain (PDZ_2)

(191-265)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

40.139

100

0.404
  eeP Streptococcus thermophilus LMG 18311

39.815

100

0.402