Detailed information NTG0943388

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: V6Z91_RS04015
• Genome accession: NZ_CP146614
• Coordinates: 903135..904598 (-)
• Length: 487 a.a.
• NCBI ID: WP_338766957.1
• Uniprot ID: -
• Organism: Massilia sp. METH4
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 898135..909598

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6Z91_RS04005	-	898341..899453 (-)	1113	WP_338766952.1	ribonucleotide-diphosphate reductase subunit beta	-
V6Z91_RS04010	-	899568..902525 (-)	2958	WP_338766955.1	ribonucleoside-diphosphate reductase subunit alpha	-
V6Z91_RS04015	pilR	903135..904598 (-)	1464	WP_338766957.1	sigma-54 dependent transcriptional regulator	Regulator
V6Z91_RS04020	-	904595..906310 (-)	1716	WP_338766959.1	ATP-binding protein	-
V6Z91_RS04025	-	906330..906605 (-)	276	WP_338766962.1	PP0621 family protein	-
V6Z91_RS04030	ccsA	906602..907405 (-)	804	WP_338766965.1	cytochrome c biogenesis protein CcsA	-
V6Z91_RS04035	-	907600..908409 (-)	810	WP_338766967.1	ABC transporter ATP-binding protein	-
V6Z91_RS04040	-	908411..909232 (-)	822	WP_338766969.1	ABC transporter permease	-

Sequence

Protein

• Length: 487 a.a.
• Molecular weight: 51806.57 Da
• Isoelectric Point: 5.0379

>NTDB_id=943388 V6Z91_RS04015 WP_338766957.1 903135..904598(-) (pilR) [Massilia sp. METH4]
MSSSPRVLVVDDEDDLRDLLEITLLKMGLDVDGAADLRGARALLAAHDYDLVLTDMRLPDGLGLELVREIAASGRNLPVA
VVTAFGSAENAVVALKAGAFDYVTKPLQLDQLRVMVQSALKLNAPPGAAAPHPGPVDSRLKGQSAAMQALRAQIARLARS
MAPIAITGESGSGKELAAREIHAQGSRADKPFIAVNCGAIPEALMEAEFFGYRKGAFTGAADERDGFFQAANGGTLMLDE
VADLPLPMQVKLLRAIQERRVRKIGATAEEPVDVRIVSATHQDLARCVEQGKFRQDLFYRLNVIELSLPPLRERLDDLPV
LTDAILARLSAASGQPATLGPGVLDALRGYSFPGNVRELENILERALAFANDGVIDVADLSLKGAKLAEVPAAAPVPGPG
PGPASAAAPPVSVPAPAPGSERMPPLPDLSVLPSNLPAYLERVEREIIVRALAQTQYNRTQAAQLLGISFRQLRYQMQKL
GIQEPEG

Nucleotide

• Length: 1464 bp

>NTDB_id=943388 V6Z91_RS04015 WP_338766957.1 903135..904598(-) (pilR) [Massilia sp. METH4]
ATGAGCTCTTCCCCCCGCGTTCTGGTAGTCGATGACGAGGACGACCTGCGCGACCTGCTGGAAATCACGCTTCTCAAGAT
GGGATTGGACGTGGACGGCGCCGCCGACCTGCGCGGCGCCCGCGCGCTGCTGGCCGCCCATGACTACGACCTGGTGCTGA
CGGACATGCGCCTGCCGGACGGCCTGGGCCTGGAACTGGTGCGCGAGATCGCCGCCAGTGGCCGCAACCTGCCGGTGGCG
GTGGTGACGGCGTTCGGCAGCGCGGAAAACGCCGTGGTGGCGCTGAAGGCGGGCGCCTTCGACTACGTGACCAAGCCCTT
GCAGCTCGACCAGCTGCGCGTGATGGTGCAGTCGGCGCTCAAGCTCAATGCGCCGCCTGGCGCCGCCGCGCCGCATCCCG
GCCCGGTGGACAGCCGGCTGAAAGGGCAGTCGGCCGCCATGCAGGCGCTGCGCGCGCAGATCGCCCGGCTGGCCCGCTCG
ATGGCGCCGATCGCCATCACCGGCGAATCGGGCTCGGGCAAGGAACTGGCGGCGCGCGAGATCCACGCGCAAGGTTCACG
GGCCGACAAGCCGTTCATCGCCGTGAACTGCGGCGCAATTCCCGAGGCGCTGATGGAGGCCGAGTTCTTCGGTTACCGCA
AGGGCGCCTTCACGGGTGCGGCGGACGAGCGCGACGGCTTCTTCCAGGCTGCCAACGGCGGCACGCTGATGCTCGACGAG
GTGGCGGACCTGCCGCTGCCCATGCAGGTGAAGCTGCTGCGCGCTATCCAGGAGCGGCGCGTGCGCAAGATCGGCGCCAC
CGCCGAGGAACCGGTGGACGTGCGCATCGTCAGCGCCACCCACCAGGACCTGGCGCGCTGCGTGGAGCAGGGCAAGTTCC
GGCAAGACCTGTTCTACCGGCTGAACGTGATCGAACTGTCGCTGCCGCCGCTGCGCGAGCGGCTCGACGATCTGCCGGTG
CTGACCGACGCGATCCTGGCCCGGCTCTCCGCCGCCAGCGGCCAGCCGGCCACCCTGGGCCCCGGCGTGCTGGACGCGCT
GCGCGGCTACAGCTTTCCCGGCAATGTGCGCGAGCTGGAAAACATCCTGGAGCGGGCGCTGGCCTTTGCCAACGATGGCG
TGATCGACGTGGCCGACCTGTCGCTGAAGGGGGCGAAGCTGGCCGAAGTGCCGGCCGCCGCGCCGGTTCCGGGTCCGGGT
CCGGGTCCGGCTTCTGCCGCCGCGCCCCCGGTTTCAGTGCCGGCGCCGGCGCCCGGCAGCGAGCGCATGCCGCCGCTGCC
CGACCTGTCCGTGCTGCCGTCGAACCTGCCAGCCTACCTGGAGCGGGTGGAGCGGGAGATCATCGTGCGCGCCCTCGCGC
AGACCCAGTACAACCGCACGCAGGCCGCGCAACTGCTGGGGATCAGTTTCCGGCAGTTGCGGTACCAGATGCAGAAGCTG
GGGATACAGGAGCCGGAGGGGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (440-480)

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Response regulator receiver domain (Response_reg) (7-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	53.015	98.768	0.524
pilR	Acinetobacter baumannii strain A118	42.708	98.563	0.421