Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   V8Z66_RS16770 Genome accession   NZ_CP146499
Coordinates   3257036..3257986 (-) Length   316 a.a.
NCBI ID   WP_028414467.1    Uniprot ID   A0AAX6BLZ5
Organism   Priestia aryabhattai strain HJ.T3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3252036..3262986
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V8Z66_RS16745 (V8Z66_16745) - 3252784..3252924 (-) 141 WP_338704721.1 hypothetical protein -
  V8Z66_RS16750 (V8Z66_16750) - 3253178..3254032 (-) 855 WP_047750489.1 manganese catalase family protein -
  V8Z66_RS16755 (V8Z66_16755) - 3254364..3255320 (-) 957 WP_255901583.1 siderophore ABC transporter substrate-binding protein -
  V8Z66_RS16760 (V8Z66_16760) - 3255344..3256102 (-) 759 WP_028414465.1 ABC transporter ATP-binding protein -
  V8Z66_RS16765 (V8Z66_16765) - 3256096..3257043 (-) 948 WP_034267834.1 iron chelate uptake ABC transporter family permease subunit -
  V8Z66_RS16770 (V8Z66_16770) ceuB 3257036..3257986 (-) 951 WP_028414467.1 ABC transporter permease Machinery gene
  V8Z66_RS16775 (V8Z66_16775) - 3258217..3258351 (-) 135 WP_255901588.1 hypothetical protein -
  V8Z66_RS16780 (V8Z66_16780) - 3258590..3259396 (-) 807 WP_048018930.1 cell wall hydrolase -
  V8Z66_RS16785 (V8Z66_16785) - 3259759..3260013 (+) 255 WP_013057893.1 hypothetical protein -
  V8Z66_RS16790 (V8Z66_16790) - 3260095..3260259 (-) 165 WP_013057894.1 hypothetical protein -
  V8Z66_RS16795 (V8Z66_16795) - 3260563..3261126 (-) 564 WP_034267823.1 NAD(P)H-dependent oxidoreductase -
  V8Z66_RS16800 (V8Z66_16800) lepB 3261361..3261921 (-) 561 WP_243494865.1 signal peptidase I -
  V8Z66_RS16805 (V8Z66_16805) - 3262008..3262367 (-) 360 WP_154973758.1 DUF4440 domain-containing protein -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34953.16 Da        Isoelectric Point: 9.9188

>NTDB_id=942893 V8Z66_RS16770 WP_028414467.1 3257036..3257986(-) (ceuB) [Priestia aryabhattai strain HJ.T3]
MKFYQLILVFAVLAVSSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTAVLGAVFVLACDILGRVIIFPYEVSIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=942893 V8Z66_RS16770 WP_028414467.1 3257036..3257986(-) (ceuB) [Priestia aryabhattai strain HJ.T3]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCGGTTTCGTCTCTTTTTGTAGGAGTACAAGACCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTCTCTCCAACAACTGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCGCTAGTTGGTTTAATGCTCGGCAGTATCGTAAGTTCCCTAGCTACCTTCATCGCTTACAAATACGATTTGATT
CAAAATCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGCGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGGTGCTTGGAGCTGTATTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAGTTTCTATTG
GGTTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.333

94.937

0.497