Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   V6986_RS14535 Genome accession   NZ_CP146358
Coordinates   2844340..2846652 (-) Length   770 a.a.
NCBI ID   WP_338592498.1    Uniprot ID   -
Organism   Bacillus safensis strain yw6     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2839340..2851652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6986_RS14495 (V6986_14495) - 2839744..2840175 (+) 432 WP_039181111.1 Na(+)/H(+) antiporter subunit B -
  V6986_RS14500 (V6986_14500) - 2840175..2840516 (+) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  V6986_RS14505 (V6986_14505) - 2840509..2841987 (+) 1479 WP_024425940.1 Na+/H+ antiporter subunit D -
  V6986_RS14510 (V6986_14510) - 2841994..2842473 (+) 480 WP_059375889.1 Na+/H+ antiporter subunit E -
  V6986_RS14515 (V6986_14515) - 2842473..2842754 (+) 282 WP_039181117.1 Na(+)/H(+) antiporter subunit F1 -
  V6986_RS14520 (V6986_14520) mnhG 2842738..2843112 (+) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  V6986_RS14525 (V6986_14525) - 2843205..2843594 (-) 390 WP_039181120.1 hotdog fold thioesterase -
  V6986_RS14530 (V6986_14530) comA 2843618..2844259 (-) 642 WP_024423322.1 response regulator transcription factor Regulator
  V6986_RS14535 (V6986_14535) comP 2844340..2846652 (-) 2313 WP_338592498.1 ATP-binding protein Regulator
  V6986_RS14540 (V6986_14540) comX 2846707..2846877 (-) 171 WP_181286101.1 competence pheromone ComX -
  V6986_RS14545 (V6986_14545) - 2846874..2847788 (-) 915 WP_338592503.1 polyprenyl synthetase family protein -
  V6986_RS14550 (V6986_14550) degQ 2847940..2848080 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  V6986_RS14555 (V6986_14555) - 2848586..2848942 (+) 357 WP_338592509.1 inner spore coat protein -
  V6986_RS14560 (V6986_14560) - 2848978..2850204 (-) 1227 WP_047203313.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89446.11 Da        Isoelectric Point: 7.6774

>NTDB_id=942755 V6986_RS14535 WP_338592498.1 2844340..2846652(-) (comP) [Bacillus safensis strain yw6]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYLIPLILYSICLFCIFFIIRINKEAQRKSAFLLVLFLLTICIGY
LSAGTSGIGERFSHYVIVFCLSSVFIFYIHFIYQYFKEFDLHITTQKTIRFLYSLPIINLVIELLVPIDSAIARYMPSLN
LLFFFASIIMSFKVIINGMRKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFLAITPTIFVVVTFYILQKPEDLKYTLKLAIITYTLMLAVFYFKEILDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIIEIDESTNDSKLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFMICCLSNIQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLDDLKQREANPAWLKKI
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLVSWNDQMSKVIQTTRETCHELRPQLLYDL
GLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKATQVLVMLICIKDQVVLHYEDD
GVGFDASHLDQHTMSMGLSGIRERVKALNGKLQIHTAPGKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=942755 V6986_RS14535 WP_338592498.1 2844340..2846652(-) (comP) [Bacillus safensis strain yw6]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTGGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTAGCGGAGAACAAGAACGGTCAAGCAGAAGTTGTCAAAGTTGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGGGAACCTGCTAACAACAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATTTAATTCCTCTTATCCTGTATTCAATTTGTTTATTTTGTATCTTCTTTA
TCATTCGAATTAACAAAGAGGCCCAACGAAAATCAGCATTTCTATTAGTTTTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCAGGTATTGGTGAGAGATTTAGCCATTACGTGATCGTATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCATTTCATTTATCAATATTTCAAAGAGTTTGACCTGCATATAACGACTCAAAAAACGATTCGATTTTTATATA
GTCTTCCTATAATTAATCTAGTTATAGAGTTATTGGTTCCAATTGATTCGGCGATAGCCAGATACATGCCAAGTTTAAAT
CTTTTATTCTTTTTCGCTTCTATTATCATGTCATTCAAAGTGATTATCAATGGAATGCGGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATAAATATCATAGCATTTTGTCCATTTATCTTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTCGTAGATCCCTTTTTCTTAACTTCTTTTGTCTTGCTCATTCCTTTTTCACTCGTGTATCAA
TTCATGACGAACAAACTTTACAATATGGATTTTTTGATTAGTAGACTGAAATACTATGGATTTCTTGCCATTACACCGAC
CATTTTTGTTGTTGTCACGTTTTATATTCTGCAAAAACCAGAAGATTTGAAGTACACACTGAAGCTCGCAATAATTACCT
ATACACTCATGCTGGCTGTTTTCTATTTCAAAGAAATTCTAGATTTCCGCTTCCGTCTGAAGCGTTTTTCAGAAAAGCAT
AATTACCAGGACAGCGTGTTTAAATTTACACAGCTCATTCGTGAGGCGTCCTCACTTCATCAAGTGCTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTTGTTGTGAATAAAGCCTTTGTGCTTGAGGTGAAGGCTGACGGACAAATTATTGAAATTG
ATGAATCAACAAATGATAGTAAGCTATGGAAAGAATACGTGGATCAATTTCAAGATATTTTAGGTGAAGTTGGGAAAATC
ATCGAGCTTGATAAAGGGTTTATGATGAAAATTGGCGAGCGGGGCGGTCACTCGTTTATGATTTGCTGCTTATCCAATAT
ACAGACACCGAAATTGACACGCGATGAGATTTCTTGGTTGAAAACATTGGCATTTTACACCAGTGTCAGTTTAGAAAATG
TCGTCAAGATCGAAGAATTGATGGAGCATCTTGACGATTTGAAACAGCGCGAGGCCAATCCTGCGTGGCTGAAGAAAATC
ATGTTTGCCATGGAAGAAAAGCAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCCGTGCTGCAGGATTTGATATCGTT
AAAAAGGCAGTCAGAGATGTTTTTAACGAATTTCCAAAACAACCAATGCCCAACCTCCATTGAAAATTCGCTTGTCTCAT
GGAACGATCAAATGTCTAAAGTGATTCAAACGACGAGAGAAACATGTCATGAGCTTCGGCCTCAGCTGCTGTATGATTTA
GGTTTAGTAAAGGCGATATCGAAGCTGACTTCTCAAATTCAGGAGGAAGCACCGTTTCATATTAGGCTGAATACGACACG
CTTTGATAAAGAATTGGACATTGATATTGATTCACAATTGAATATTTACCGTATTGTTCAGGAGCTGTTATCTAATGCCC
TGAAGCACTCTAAAGCCACTCAAGTGTTAGTGATGCTAATTTGTATTAAAGATCAGGTTGTTCTTCACTATGAGGATGAT
GGAGTCGGTTTTGATGCAAGTCATCTTGATCAGCACACAATGAGCATGGGGCTTTCGGGAATTAGAGAACGAGTCAAAGC
ATTAAATGGAAAGCTTCAAATTCACACAGCCCCGGGGAAAGGGCTTAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.032

100

0.494