Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   V6986_RS05570 Genome accession   NZ_CP146358
Coordinates   1155112..1155309 (+) Length   65 a.a.
NCBI ID   WP_024425054.1    Uniprot ID   A0AAX0Z5U3
Organism   Bacillus safensis strain yw6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1150112..1160309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6986_RS05540 (V6986_05540) - 1150516..1150695 (+) 180 WP_008348517.1 YjzC family protein -
  V6986_RS05545 (V6986_05545) - 1150856..1152121 (+) 1266 WP_024426491.1 MFS transporter -
  V6986_RS05550 (V6986_05550) - 1152248..1152442 (-) 195 WP_003211779.1 YjzD family protein -
  V6986_RS05555 (V6986_05555) - 1152655..1153395 (+) 741 WP_144495199.1 hypothetical protein -
  V6986_RS05560 (V6986_05560) - 1153469..1154044 (+) 576 WP_059374928.1 hypothetical protein -
  V6986_RS05565 (V6986_05565) med 1154136..1155098 (+) 963 WP_058838840.1 BMP family ABC transporter substrate-binding protein Regulator
  V6986_RS05570 (V6986_05570) comZ 1155112..1155309 (+) 198 WP_024425054.1 ComZ family protein Regulator
  V6986_RS05575 (V6986_05575) - 1155320..1155553 (-) 234 WP_058838841.1 hypothetical protein -
  V6986_RS05580 (V6986_05580) - 1155725..1156663 (+) 939 WP_024425052.1 beta-ketoacyl-ACP synthase III -
  V6986_RS05585 (V6986_05585) fabF 1156685..1157926 (+) 1242 WP_039177794.1 beta-ketoacyl-ACP synthase II -
  V6986_RS05590 (V6986_05590) - 1158004..1158807 (+) 804 WP_039177797.1 DUF2268 domain-containing protein -
  V6986_RS05595 (V6986_05595) - 1158957..1159937 (+) 981 WP_039177799.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7405.45 Da        Isoelectric Point: 4.1652

>NTDB_id=942724 V6986_RS05570 WP_024425054.1 1155112..1155309(+) (comZ) [Bacillus safensis strain yw6]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=942724 V6986_RS05570 WP_024425054.1 1155112..1155309(+) (comZ) [Bacillus safensis strain yw6]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCAAAGGAAGAATTAGATAAAGC
AGGGATTCAGCTTGAGCCTGAAGCGCTTCAGCCGCTGCTAACATTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677