Detailed information NTG0942723

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: V6986_RS05565
• Genome accession: NZ_CP146358
• Coordinates: 1154136..1155098 (+)
• Length: 320 a.a.
• NCBI ID: WP_058838840.1
• Uniprot ID: -
• Organism: Bacillus safensis strain yw6
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1149136..1160098

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6986_RS05535 (V6986_05535)	argF	1149463..1150413 (+)	951	WP_047201780.1	ornithine carbamoyltransferase	-
V6986_RS05540 (V6986_05540)	-	1150516..1150695 (+)	180	WP_008348517.1	YjzC family protein	-
V6986_RS05545 (V6986_05545)	-	1150856..1152121 (+)	1266	WP_024426491.1	MFS transporter	-
V6986_RS05550 (V6986_05550)	-	1152248..1152442 (-)	195	WP_003211779.1	YjzD family protein	-
V6986_RS05555 (V6986_05555)	-	1152655..1153395 (+)	741	WP_144495199.1	hypothetical protein	-
V6986_RS05560 (V6986_05560)	-	1153469..1154044 (+)	576	WP_059374928.1	hypothetical protein	-
V6986_RS05565 (V6986_05565)	med	1154136..1155098 (+)	963	WP_058838840.1	BMP family ABC transporter substrate-binding protein	Regulator
V6986_RS05570 (V6986_05570)	comZ	1155112..1155309 (+)	198	WP_024425054.1	ComZ family protein	Regulator
V6986_RS05575 (V6986_05575)	-	1155320..1155553 (-)	234	WP_058838841.1	hypothetical protein	-
V6986_RS05580 (V6986_05580)	-	1155725..1156663 (+)	939	WP_024425052.1	beta-ketoacyl-ACP synthase III	-
V6986_RS05585 (V6986_05585)	fabF	1156685..1157926 (+)	1242	WP_039177794.1	beta-ketoacyl-ACP synthase II	-
V6986_RS05590 (V6986_05590)	-	1158004..1158807 (+)	804	WP_039177797.1	DUF2268 domain-containing protein	-
V6986_RS05595 (V6986_05595)	-	1158957..1159937 (+)	981	WP_039177799.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35667.53 Da
• Isoelectric Point: 5.0003

>NTDB_id=942723 V6986_RS05565 WP_058838840.1 1154136..1155098(+) (med) [Bacillus safensis strain yw6]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSTTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=942723 V6986_RS05565 WP_058838840.1 1154136..1155098(+) (med) [Bacillus safensis strain yw6]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGTGAAATTTTCAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGACAATGTCACAAACGTGACATTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCTAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAGGTAGACGGCTTTATCAAAGGGGCAAAATATCAAGATGAACATGTACAAGTGTTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTAGATGTTGTGTATCCCGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGGTACGTGACCGATCAATCC
AACCTCGGAAGTCATACGGTTTTAACGAGCACTGTCCAGCATGTTGATAAAGCGTACAGCATCATTGCAAAGAAATTTAA
TGAAGGCAAGCTAAATGAACAAGGTGAGTACTCCTTTGATTTTAAAGAAGGAGTGATCGAGATGGGGAAATTTAGCACCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.537	97.813	0.631