Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   V6L79_RS04630 Genome accession   NZ_CP146347
Coordinates   1004312..1004719 (+) Length   135 a.a.
NCBI ID   WP_261740580.1    Uniprot ID   -
Organism   Pseudomonas sp. ML2-2023-6 strain L2-2023-6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 999312..1009719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6L79_RS04600 (V6L79_04600) - 999366..1000370 (-) 1005 WP_019828034.1 aspartate carbamoyltransferase catalytic subunit -
  V6L79_RS04605 (V6L79_04605) pyrR 1000383..1000889 (-) 507 WP_261740576.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  V6L79_RS04610 (V6L79_04610) ruvX 1000972..1001412 (-) 441 WP_261740577.1 Holliday junction resolvase RuvX -
  V6L79_RS04615 (V6L79_04615) - 1001412..1001984 (-) 573 WP_261740578.1 YqgE/AlgH family protein -
  V6L79_RS04620 (V6L79_04620) - 1002147..1003046 (-) 900 WP_261740579.1 energy transducer TonB -
  V6L79_RS04625 (V6L79_04625) gshB 1003123..1004076 (-) 954 WP_133075178.1 glutathione synthase -
  V6L79_RS04630 (V6L79_04630) pilG 1004312..1004719 (+) 408 WP_261740580.1 twitching motility response regulator PilG Regulator
  V6L79_RS04635 (V6L79_04635) pilH 1004762..1005139 (+) 378 WP_261740581.1 twitching motility response regulator PilH -
  V6L79_RS04640 (V6L79_04640) - 1005150..1005689 (+) 540 WP_261740582.1 chemotaxis protein CheW -
  V6L79_RS04645 (V6L79_04645) - 1005731..1007788 (+) 2058 WP_405046610.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14922.53 Da        Isoelectric Point: 9.1707

>NTDB_id=942659 V6L79_RS04630 WP_261740580.1 1004312..1004719(+) (pilG) [Pseudomonas sp. ML2-2023-6 strain L2-2023-6]
MEKHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIVDHHPHIIFVDIMMPRLDGYQTCALIKSNRAFK
SIPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSRDELLSAIKAHVPAFNIVQSAL

Nucleotide


Download         Length: 408 bp        

>NTDB_id=942659 V6L79_RS04630 WP_261740580.1 1004312..1004719(+) (pilG) [Pseudomonas sp. ML2-2023-6 strain L2-2023-6]
ATGGAAAAGCATTCCAGCGCCTTGAAGGTGATGGTGATTGACGATTCGAAAACCATTCGCCGCACCGCCGAAACGCTGCT
GAAAAACGTGGGCTGCGAGGTCATTACCGCTATCGACGGTTTCGATGCGCTGGCCAAGATTGTCGACCACCATCCGCACA
TCATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCACTGATCAAGAGCAATCGGGCGTTCAAA
TCGATCCCCGTGATCATGCTGTCATCCAAGGACGGTCTGTTCGACAAGGCCAAGGGGCGGATCGTGGGTTCTGATCAATT
TTTGACCAAGCCCTTCAGCCGTGATGAATTGCTGAGTGCCATCAAGGCCCATGTGCCCGCCTTCAACATCGTACAAAGTG
CTCTATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.228

94.074

0.689
  vicR Streptococcus mutans UA159

39.37

94.074

0.37