Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   V6P94_RS04530 Genome accession   NZ_CP146343
Coordinates   977175..977582 (+) Length   135 a.a.
NCBI ID   WP_019828024.1    Uniprot ID   A0A8I1FPA4
Organism   Pseudomonas sp. ML2-2023-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 972175..982582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6P94_RS04500 (V6P94_04500) - 972204..973208 (-) 1005 WP_019828034.1 aspartate carbamoyltransferase catalytic subunit -
  V6P94_RS04505 (V6P94_04505) pyrR 973226..973741 (-) 516 WP_133075174.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  V6P94_RS04510 (V6P94_04510) ruvX 973826..974266 (-) 441 WP_133075175.1 Holliday junction resolvase RuvX -
  V6P94_RS04515 (V6P94_04515) - 974266..974838 (-) 573 WP_133075176.1 YqgE/AlgH family protein -
  V6P94_RS04520 (V6P94_04520) - 974998..975897 (-) 900 WP_133075177.1 TonB family protein -
  V6P94_RS04525 (V6P94_04525) gshB 975975..976928 (-) 954 WP_133075178.1 glutathione synthase -
  V6P94_RS04530 (V6P94_04530) pilG 977175..977582 (+) 408 WP_019828024.1 twitching motility response regulator PilG Regulator
  V6P94_RS04535 (V6P94_04535) pilH 977625..978002 (+) 378 WP_326398645.1 twitching motility response regulator PilH -
  V6P94_RS04540 (V6P94_04540) - 978013..978552 (+) 540 WP_133075180.1 chemotaxis protein CheW -
  V6P94_RS04545 (V6P94_04545) - 978594..980651 (+) 2058 WP_133075181.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14925.45 Da        Isoelectric Point: 9.1707

>NTDB_id=942636 V6P94_RS04530 WP_019828024.1 977175..977582(+) (pilG) [Pseudomonas sp. ML2-2023-3]
MEKHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIVDHHPHIIFVDIMMPRLDGYQTCALIKSNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSRDELLSAIKAHVPAFNIVQSAQ

Nucleotide


Download         Length: 408 bp        

>NTDB_id=942636 V6P94_RS04530 WP_019828024.1 977175..977582(+) (pilG) [Pseudomonas sp. ML2-2023-3]
ATGGAAAAACATTCCAGCGCCTTGAAGGTGATGGTAATCGACGATTCGAAAACCATTCGCCGCACCGCCGAAACGCTGTT
GAAAAACGTGGGCTGCGAGGTCATTACCGCCATCGACGGTTTCGATGCGCTGGCCAAGATTGTCGACCATCATCCGCACA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGCTATCAGACCTGCGCACTGATCAAGAGCAACCGGGCGTTCAAG
TCGACCCCCGTGATCATGCTGTCGTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGACGAATTGTGGGTTCTGATCAATT
TTTGACCAAGCCCTTCAGCCGTGATGAATTGCTGAGCGCAATCAAGGCCCATGTGCCAGCCTTCAATATCGTACAAAGTG
CTCAATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.441

94.074

0.681
  vicR Streptococcus mutans UA159

39.683

93.333

0.37