Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   V1210_RS01505 Genome accession   NZ_CP146066
Coordinates   305866..306762 (+) Length   298 a.a.
NCBI ID   WP_107611263.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain SCT27     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 300866..311762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1210_RS01470 (V1210_01470) - 301125..301574 (+) 450 WP_033079678.1 MarR family winged helix-turn-helix transcriptional regulator -
  V1210_RS01475 (V1210_01475) - 301638..302264 (-) 627 WP_326008164.1 FMN-dependent NADH-azoreductase -
  V1210_RS01480 (V1210_01480) - 302484..302585 (+) 102 WP_016930637.1 SE2200 family small protein -
  V1210_RS01485 (V1210_01485) - 302786..304246 (-) 1461 WP_326008166.1 alkaline phosphatase -
  V1210_RS01490 (V1210_01490) - 304645..304815 (+) 171 WP_182477408.1 hypothetical protein -
  V1210_RS01495 (V1210_01495) - 305001..305165 (+) 165 WP_011274729.1 hypothetical protein -
  V1210_RS01500 (V1210_01500) braR 305195..305863 (+) 669 WP_317955524.1 response regulator transcription factor Regulator
  V1210_RS01505 (V1210_01505) braS 305866..306762 (+) 897 WP_107611263.1 sensor histidine kinase Regulator
  V1210_RS01510 (V1210_01510) - 306935..307684 (+) 750 WP_107613233.1 ABC transporter ATP-binding protein -
  V1210_RS01515 (V1210_01515) - 307812..309677 (+) 1866 WP_338594480.1 FtsX-like permease family protein -
  V1210_RS01520 (V1210_01520) - 309767..310960 (+) 1194 WP_317955519.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34783.28 Da        Isoelectric Point: 6.8314

>NTDB_id=941503 V1210_RS01505 WP_107611263.1 305866..306762(+) (braS) [Staphylococcus haemolyticus strain SCT27]
MLKAFIKSILNEISIVITFILLFLLIFFLFNLPLSAYLLGTGIMLFIMIIYWLVQLSGFREQVQMRDTIHELEHELQQVK
SDQTEYQANVENYFLTWVHQMKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNQETDMSFSKVKINDL
VRPLIMKYSIQFIDQKTKIHYERCEDEVLTDAQWCSIMIEQILNNALKYARGKDIWITFDQQQHVLTIRDNGVGISQADL
PKIFDKGYSGYNGRLNANSSGIGLFIVKHISQHLHHHVDVQSELNKGTAFNIYFPKNN

Nucleotide


Download         Length: 897 bp        

>NTDB_id=941503 V1210_RS01505 WP_107611263.1 305866..306762(+) (braS) [Staphylococcus haemolyticus strain SCT27]
ATGCTGAAAGCTTTTATTAAATCAATACTAAATGAAATCAGTATAGTCATCACATTTATATTATTATTCTTACTTATCTT
CTTTCTATTTAATTTGCCACTGAGTGCGTATCTATTGGGTACCGGAATAATGCTGTTCATCATGATAATTTATTGGTTAG
TTCAATTAAGTGGGTTTAGAGAACAAGTTCAGATGAGAGACACTATTCATGAACTAGAGCATGAATTGCAACAGGTGAAA
AGTGATCAAACTGAATATCAAGCTAATGTGGAGAATTATTTTTTAACATGGGTTCATCAAATGAAGACACCTATTACAGC
ATCTAAATTGTTGTTAGAGCGTAATGAAGATAATGTCGTCAATCGAGTGCGTCAAGAAATTATTCAAATTGATAATTATA
CAAGTTTAGCGTTAAGTTATTTAAAATTAATGAATCAAGAAACGGATATGTCCTTTTCAAAAGTGAAGATTAATGATCTT
GTCCGTCCATTAATTATGAAATATTCTATTCAATTTATTGATCAGAAGACAAAGATTCATTATGAACGGTGTGAGGATGA
AGTTCTGACTGATGCACAATGGTGTTCAATAATGATTGAACAGATTCTAAATAATGCATTGAAGTATGCGCGAGGTAAGG
ACATTTGGATTACGTTTGACCAACAACAGCATGTATTAACTATTCGTGATAATGGCGTCGGTATTAGTCAAGCTGACTTA
CCGAAGATCTTTGATAAAGGCTATTCAGGATATAATGGTCGATTGAATGCTAATTCATCAGGCATTGGATTGTTTATTGT
TAAACATATCTCGCAACATTTACATCATCATGTAGATGTACAGTCTGAGTTGAACAAAGGTACGGCATTTAATATTTATT
TCCCGAAAAATAATTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

63.356

97.987

0.621