Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   V1210_RS01500 Genome accession   NZ_CP146066
Coordinates   305195..305863 (+) Length   222 a.a.
NCBI ID   WP_317955524.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain SCT27     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 300195..310863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V1210_RS01470 (V1210_01470) - 301125..301574 (+) 450 WP_033079678.1 MarR family winged helix-turn-helix transcriptional regulator -
  V1210_RS01475 (V1210_01475) - 301638..302264 (-) 627 WP_326008164.1 FMN-dependent NADH-azoreductase -
  V1210_RS01480 (V1210_01480) - 302484..302585 (+) 102 WP_016930637.1 SE2200 family small protein -
  V1210_RS01485 (V1210_01485) - 302786..304246 (-) 1461 WP_326008166.1 alkaline phosphatase -
  V1210_RS01490 (V1210_01490) - 304645..304815 (+) 171 WP_182477408.1 hypothetical protein -
  V1210_RS01495 (V1210_01495) - 305001..305165 (+) 165 WP_011274729.1 hypothetical protein -
  V1210_RS01500 (V1210_01500) braR 305195..305863 (+) 669 WP_317955524.1 response regulator transcription factor Regulator
  V1210_RS01505 (V1210_01505) braS 305866..306762 (+) 897 WP_107611263.1 sensor histidine kinase Regulator
  V1210_RS01510 (V1210_01510) - 306935..307684 (+) 750 WP_107613233.1 ABC transporter ATP-binding protein -
  V1210_RS01515 (V1210_01515) - 307812..309677 (+) 1866 WP_338594480.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25669.51 Da        Isoelectric Point: 4.5713

>NTDB_id=941502 V1210_RS01500 WP_317955524.1 305195..305863(+) (braR) [Staphylococcus haemolyticus strain SCT27]
MKVFIVEDDFVIAESLEQELSKWNYEVIVAKQFDNIIDVFNANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISPR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEITVKDCKLVVDEATLYHEGESVQLSFTELQILN
MLFRNEGKYVSRTTLIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVIDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=941502 V1210_RS01500 WP_317955524.1 305195..305863(+) (braR) [Staphylococcus haemolyticus strain SCT27]
ATGAAAGTATTCATCGTGGAAGATGATTTTGTCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTAATGCAAATCAACCACAACTCGTGTTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTGCCGATTATGTTTATTAGTCCAAGA
ACCGATAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGATTTTATCGAGAAACCATTTAATTTATCGTTAAC
GGTAACTAAGATTCAAGCATTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAATTACTGTGAAAGATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGGCGAATCGGTTCAATTGTCCTTTACTGAATTACAAATCTTAAAT
ATGTTGTTCCGCAATGAAGGTAAGTATGTCAGCCGTACCACATTGATTGAAAAGTGTTGGGAGTCAGAGAATTTTATAGA
TGACAATACTTTAGCAGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTATAGATTTAATTGAAACTA
AGAAGAATGTTGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(146-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

99.55

0.77