Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   V6K67_RS01615 Genome accession   NZ_CP145941
Coordinates   308749..309516 (+) Length   255 a.a.
NCBI ID   WP_011226714.1    Uniprot ID   Q5M227
Organism   Streptococcus thermophilus strain TCI633     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 303749..314516
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6K67_RS01600 (V6K67_01600) - 306065..306748 (-) 684 WP_011226711.1 YoaK family protein -
  V6K67_RS01605 (V6K67_01605) rlmH 306764..307243 (-) 480 WP_011226712.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V6K67_RS01610 (V6K67_01610) htrA 307448..308683 (+) 1236 WP_338500873.1 trypsin-like peptidase domain-containing protein Regulator
  V6K67_RS01615 (V6K67_01615) spo0J 308749..309516 (+) 768 WP_011226714.1 ParB/RepB/Spo0J family partition protein Regulator
  V6K67_RS01620 (V6K67_01620) dnaA 309756..311120 (+) 1365 WP_002948584.1 chromosomal replication initiator protein DnaA -
  V6K67_RS01625 (V6K67_01625) dnaN 311275..312411 (+) 1137 WP_011226715.1 DNA polymerase III subunit beta -
  V6K67_RS01630 (V6K67_01630) - 312462..312653 (+) 192 WP_011226716.1 DUF951 domain-containing protein -
  V6K67_RS01635 (V6K67_01635) ychF 312866..313981 (+) 1116 WP_002948588.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29485.94 Da        Isoelectric Point: 9.6649

>NTDB_id=941232 V6K67_RS01615 WP_011226714.1 308749..309516(+) (spo0J) [Streptococcus thermophilus strain TCI633]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDIHVKDKEKELERLLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=941232 V6K67_RS01615 WP_011226714.1 308749..309516(+) (spo0J) [Streptococcus thermophilus strain TCI633]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGCTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATATCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATTACTAGGTCTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M227

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569