Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AAEM60_RS08195 Genome accession   NZ_CP145886
Coordinates   1644939..1645127 (+) Length   62 a.a.
NCBI ID   WP_299740238.1    Uniprot ID   -
Organism   Rossellomorea sp. y25     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1639939..1650127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAEM60_RS08175 (V2W31_08175) - 1641925..1642107 (-) 183 WP_299740230.1 DUF2929 family protein -
  AAEM60_RS08180 (V2W31_08180) - 1642378..1643121 (+) 744 WP_299740232.1 hydrolase -
  AAEM60_RS08185 (V2W31_08185) - 1643144..1643860 (+) 717 WP_299740234.1 hypothetical protein -
  AAEM60_RS08190 (V2W31_08190) med 1643974..1644942 (+) 969 WP_299740236.1 BMP family ABC transporter substrate-binding protein Regulator
  AAEM60_RS08195 (V2W31_08195) comZ 1644939..1645127 (+) 189 WP_299740238.1 ComZ family protein Regulator
  AAEM60_RS08200 (V2W31_08200) - 1645176..1645391 (-) 216 WP_341357801.1 hypothetical protein -
  AAEM60_RS08205 (V2W31_08205) - 1645593..1646525 (+) 933 WP_299740242.1 beta-ketoacyl-ACP synthase III -
  AAEM60_RS08210 (V2W31_08210) fabF 1646570..1647814 (+) 1245 WP_341357802.1 beta-ketoacyl-ACP synthase II -
  AAEM60_RS08215 (V2W31_08215) - 1647911..1648678 (+) 768 WP_341357803.1 DUF2268 domain-containing putative Zn-dependent protease -
  AAEM60_RS08220 (V2W31_08220) - 1648829..1649050 (+) 222 WP_299740246.1 hypothetical protein -
  AAEM60_RS08225 (V2W31_08225) - 1649135..1649884 (+) 750 WP_299740249.1 YjbA family protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7279.39 Da        Isoelectric Point: 4.3885

>NTDB_id=940896 AAEM60_RS08195 WP_299740238.1 1644939..1645127(+) (comZ) [Rossellomorea sp. y25]
MNQDKTMEFMQIAMKYFPQAKEQLDQAGVEFSPEMLQPFMTLFTQVMSEAYELGKQEALHNK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=940896 AAEM60_RS08195 WP_299740238.1 1644939..1645127(+) (comZ) [Rossellomorea sp. y25]
ATGAATCAAGACAAAACGATGGAATTTATGCAAATTGCCATGAAGTACTTCCCGCAAGCAAAAGAGCAACTTGATCAAGC
GGGTGTTGAGTTCTCTCCTGAGATGCTGCAACCATTTATGACACTGTTTACACAAGTCATGAGTGAAGCCTATGAATTAG
GCAAACAGGAAGCCTTACATAACAAGTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

63.793

93.548

0.597