Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   V6U69_RS02065 Genome accession   NZ_CP145867
Coordinates   387421..388152 (+) Length   243 a.a.
NCBI ID   WP_198463665.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS10     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 382421..393152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U69_RS02045 (V6U69_02045) - 383294..385399 (+) 2106 WP_410534066.1 AAA family ATPase -
  V6U69_RS02050 (V6U69_02050) - 385833..386609 (+) 777 WP_021143708.1 FxLYD domain-containing protein -
  V6U69_RS02055 (V6U69_02055) - 386641..386940 (-) 300 WP_060972580.1 hypothetical protein -
  V6U69_RS02060 (V6U69_02060) - 386937..387356 (-) 420 WP_211181055.1 HIT family protein -
  V6U69_RS02065 (V6U69_02065) pptA 387421..388152 (+) 732 WP_198463665.1 ABC transporter ATP-binding protein Regulator
  V6U69_RS02070 (V6U69_02070) pptB 388149..389186 (+) 1038 WP_410534069.1 ABC transporter permease Regulator
  V6U69_RS02075 (V6U69_02075) ccrZ 389244..390035 (+) 792 WP_002884270.1 cell cycle regulator CcrZ -
  V6U69_RS02080 (V6U69_02080) trmB 390045..390686 (+) 642 WP_410534071.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  V6U69_RS02090 (V6U69_02090) - 390941..392122 (-) 1182 WP_410534073.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26808.04 Da        Isoelectric Point: 4.4174

>NTDB_id=940769 V6U69_RS02065 WP_198463665.1 387421..388152(+) (pptA) [Streptococcus salivarius strain KSS10]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLLIVDEPF
LGLDPLAISDLIELLAEEKANGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=940769 V6U69_RS02065 WP_198463665.1 387421..388152(+) (pptA) [Streptococcus salivarius strain KSS10]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTATATGAAGAGTTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGGATGGCACGTGCTGATAAATACCTCAAGCTCTTTCGCTTAGATGAAAAGTTAGATTGGTTCCCGACTCAGTTTT
CAAAGGGAATGAAGCAGAAGGTTATGATTATCTGTGCCTTTATTGTTAACCCCAGTCTTCTCATTGTTGATGAGCCCTTC
TTGGGTTTGGATCCCTTGGCAATCTCCGACCTAATTGAGCTTTTAGCTGAGGAAAAAGCGAATGGTAAGGCGATTCTCAT
GTCTACCCACGTTTTGGATTCGGCTGAGAAAATGTGTGATCGCTTTGTGATTTTGCACCATGGACAGGTCTTAGCACAGG
GGACTCTCGAGGAGCTCCGTCAGACTTTTGGCGACGATAGTGCTAGTCTTAACGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

98.765

100

0.988
  pptA Streptococcus thermophilus LMD-9

97.531

100

0.975