Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   V6U69_RS00015 Genome accession   NZ_CP145867
Coordinates   2726..3493 (-) Length   255 a.a.
NCBI ID   WP_195435977.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS10     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1..8493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U69_RS00010 (V6U69_00010) dnaA 1124..2488 (-) 1365 WP_037599382.1 chromosomal replication initiator protein DnaA -
  V6U69_RS00015 (V6U69_00015) spo0J 2726..3493 (-) 768 WP_195435977.1 ParB/RepB/Spo0J family partition protein Regulator
  V6U69_RS00020 (V6U69_00020) htrA 3559..4794 (-) 1236 WP_002892211.1 S1C family serine protease Regulator
  V6U69_RS00025 (V6U69_00025) rlmH 5000..5479 (+) 480 WP_107373293.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V6U69_RS00030 (V6U69_00030) - 5496..6179 (+) 684 WP_002892206.1 YoaK family protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29321.78 Da        Isoelectric Point: 9.5936

>NTDB_id=940752 V6U69_RS00015 WP_195435977.1 2726..3493(-) (spo0J) [Streptococcus salivarius strain KSS10]
MQEQLKALPISEIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVSDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPKEIQTSIENGKLSQG
HARALLSVEGTQKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=940752 V6U69_RS00015 WP_195435977.1 2726..3493(-) (spo0J) [Streptococcus salivarius strain KSS10]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGAAATCTACCCAAATCCTTTTCAACCTCGTATAGAATTCTCTGATGA
AGAATTAGCAGAACTGAGCCAATCAATCGCTGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGACATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTGGGAATGACAGAAATCCCTGCAGTCGTAAAG
GAAGTCTCAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGCTCGAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGTTAGCTTACAGTCACGAGGAACTGGCAAAAGCTATGGGGAAATCCAGGCCCT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCAAAGAGATACAGACAAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCGCTTTTATCTGTTGAGGGTACCCAAAAGCAATTAACTATCTATCATCAGGTGCTTACTGAAAAATGGTC
CGTTCGTACTCTGGAAAAAAGACTTCAAGAACTTCCTAAAAAACAAAAATCAAAAAAAGATATTCACATAAAAGATAAAG
AAAAAGAACTAGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTAATTTGA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58