Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   V6U68_RS10075 Genome accession   NZ_CP145866
Coordinates   2134818..2135585 (+) Length   255 a.a.
NCBI ID   WP_195435977.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2129818..2140585
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U68_RS10060 (V6U68_10040) - 2132132..2132815 (-) 684 WP_002892206.1 YoaK family protein -
  V6U68_RS10065 (V6U68_10045) rlmH 2132832..2133311 (-) 480 WP_037598563.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V6U68_RS10070 (V6U68_10050) htrA 2133517..2134752 (+) 1236 WP_002892211.1 S1C family serine protease Regulator
  V6U68_RS10075 (V6U68_10055) spo0J 2134818..2135585 (+) 768 WP_195435977.1 ParB/RepB/Spo0J family partition protein Regulator
  V6U68_RS10080 (V6U68_10060) dnaA 2135823..2137187 (+) 1365 WP_037599382.1 chromosomal replication initiator protein DnaA -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29321.78 Da        Isoelectric Point: 9.5936

>NTDB_id=940751 V6U68_RS10075 WP_195435977.1 2134818..2135585(+) (spo0J) [Streptococcus salivarius strain KSS9]
MQEQLKALPISEIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVSDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPKEIQTSIENGKLSQG
HARALLSVEGTQKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=940751 V6U68_RS10075 WP_195435977.1 2134818..2135585(+) (spo0J) [Streptococcus salivarius strain KSS9]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGAAATCTACCCAAATCCTTTTCAACCTCGTATAGAATTCTCTGATGA
AGAATTAGCAGAACTGAGCCAATCAATCGCTGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGACATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTGGGAATGACAGAAATCCCTGCAGTCGTAAAG
GAAGTCTCAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGCTCGAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGTTAGCTTACAGTCACGAGGAACTGGCAAAAGCTATGGGGAAATCCAGGCCCT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCAAAGAGATACAGACAAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCGCTTTTATCTGTTGAGGGTACCCAAAAGCAATTAACTATCTATCATCAGGTGCTTACTGAAAAATGGTC
CGTTCGTACTCTGGAAAAAAGACTTCAAGAACTTCCTAAAAAACAAAAATCAAAAAAAGATATTCACATAAAAGATAAAG
AAAAAGAACTAGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTAATTTGA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58