Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   V6U68_RS01020 Genome accession   NZ_CP145866
Coordinates   184656..185918 (+) Length   420 a.a.
NCBI ID   WP_410531732.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS9     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 179656..190918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U68_RS00975 - 179887..179988 (+) 102 WP_125411869.1 transaldolase family protein -
  V6U68_RS00980 (V6U68_00975) - 180030..180323 (+) 294 WP_155124062.1 transaldolase family protein -
  V6U68_RS00985 (V6U68_00980) - 180366..180551 (+) 186 WP_081370832.1 hypothetical protein -
  V6U68_RS00990 (V6U68_00985) - 180816..181145 (-) 330 Protein_154 transposase -
  V6U68_RS00995 (V6U68_00990) - 181190..181618 (+) 429 Protein_155 ATP-binding cassette domain-containing protein -
  V6U68_RS01000 (V6U68_00995) - 181774..182490 (+) 717 WP_002883635.1 YebC/PmpR family DNA-binding transcriptional regulator -
  V6U68_RS01005 (V6U68_01000) - 182616..182954 (+) 339 WP_073686593.1 preprotein translocase subunit YajC -
  V6U68_RS01010 (V6U68_01005) - 183083..183832 (+) 750 WP_002886457.1 isoprenyl transferase -
  V6U68_RS01015 (V6U68_01010) - 183845..184639 (+) 795 WP_179968621.1 phosphatidate cytidylyltransferase -
  V6U68_RS01020 (V6U68_01015) eeP 184656..185918 (+) 1263 WP_410531732.1 RIP metalloprotease RseP Regulator
  V6U68_RS01025 (V6U68_01020) - 185989..187851 (+) 1863 WP_096832809.1 proline--tRNA ligase -
  V6U68_RS01030 (V6U68_01025) - 188458..190398 (+) 1941 WP_410531733.1 ABC transporter substrate binding protein -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 45740.13 Da        Isoelectric Point: 6.1599

>NTDB_id=940692 V6U68_RS01020 WP_410531732.1 184656..185918(+) (eeP) [Streptococcus salivarius strain KSS9]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTIGSDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLDETKTYEVDHDATIIEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNRIQVADGGAAQVAGLKNGDAIEAINKDKVTDWDSLKE
ALTENTQKFSKGDSLSVTVKRSNGQEETVSVKPKESQGSYFLGVSPALKTGLKDKIFGGFQMAWEGAFKILVALKGLITN
FSLNKLGGPVAMFQMSAQASESGLISILNLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AIMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=940692 V6U68_RS01020 WP_410531732.1 184656..185918(+) (eeP) [Streptococcus salivarius strain KSS9]
ATGAAAGCTATTATTACCTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGTCATTTCTTTTTCGCCAA
ACGCTCAGGAATTTTGGTTCGTGAATTTGCCATTGGTATGGGACCGAAAATTTTTGCACACACTGGTAAGGATGGTACCG
TTTATACTATCCGTATCCTCCCTTTAGGTGGTTATGTCCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACA
GGTAGCCCTGCCAGTCTAACGATTGGATCAGATGGTAAGGTAAGACGTATCAACCTTTCGGATCGCCAGGTTGACCAGAC
GGCTTTACCTATGAACGTCACTGCCTATGATTTGGAAGATAAGTTAACCATTACAGGTCTAGTCCTAGATGAGACCAAGA
CCTATGAGGTTGACCATGATGCCACTATCATTGAGGAGGATGGTACAGAACTTCGTATCGCTCCTAAGGATGTCCAATAT
CAAAATGCTAGCATTTGGGGACGCTTAATTACCAACTTTGCTGGTCCTATGAATAACTTCATTCTTGGGGTGCTTGTCTT
TATTATCTTAGCCTTTGTTCAAGGTGGTGTTCAAGACACATCAACCAACCGTATTCAGGTGGCTGATGGTGGTGCTGCTC
AGGTAGCAGGCTTGAAAAATGGTGATGCCATCGAGGCCATCAATAAGGACAAGGTTACTGATTGGGACAGCTTGAAGGAA
GCATTGACAGAGAATACTCAAAAATTCTCCAAAGGTGACAGCCTTTCTGTGACGGTTAAGAGAAGTAACGGTCAGGAAGA
AACGGTCTCTGTTAAACCTAAGGAGAGTCAAGGTAGCTACTTTTTGGGTGTTTCTCCTGCCTTAAAAACAGGTCTAAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGGGCCTTCAAAATTCTCGTGGCACTCAAGGGGCTTATCACCAAC
TTTAGTTTGAATAAACTTGGTGGACCAGTTGCCATGTTCCAGATGTCTGCCCAGGCTTCAGAAAGTGGCTTGATTTCCAT
TCTTAACCTTATGGGGATGCTCTCAATTAACTTGGGAATTTTCAATCTTATCCCAATTCCAGCCCTTGACGGTGGAAAAA
TTGTTATGAATATTATTGAAGCCATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATTACACTTGCAGGTGTT
GCTATCATGGTTGTTCTTATGATTGCAGTCACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-406)

PDZ domain (PDZ_2)

(205-272)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

95.476

100

0.955
  eeP Streptococcus thermophilus LMG 18311

95.238

100

0.952