Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   V6U67_RS01130 Genome accession   NZ_CP145865
Coordinates   207603..208865 (+) Length   420 a.a.
NCBI ID   WP_349955208.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS8     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 202603..213865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U67_RS01105 (V6U67_01110) - 202988..204565 (+) 1578 WP_022496557.1 ATP-binding cassette domain-containing protein -
  V6U67_RS01110 (V6U67_01115) - 204721..205437 (+) 717 WP_002883635.1 YebC/PmpR family DNA-binding transcriptional regulator -
  V6U67_RS01115 (V6U67_01120) - 205563..205901 (+) 339 WP_022496558.1 preprotein translocase subunit YajC -
  V6U67_RS01120 (V6U67_01125) - 206030..206779 (+) 750 WP_002886457.1 isoprenyl transferase -
  V6U67_RS01125 (V6U67_01130) - 206792..207586 (+) 795 WP_070437422.1 phosphatidate cytidylyltransferase -
  V6U67_RS01130 (V6U67_01135) eeP 207603..208865 (+) 1263 WP_349955208.1 M50 family metallopeptidase Regulator
  V6U67_RS01135 (V6U67_01140) - 208936..210798 (+) 1863 WP_141760060.1 proline--tRNA ligase -
  V6U67_RS01140 (V6U67_01145) - 211280..213220 (+) 1941 WP_155222431.1 ABC transporter substrate binding protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45824.16 Da        Isoelectric Point: 5.8010

>NTDB_id=940625 V6U67_RS01130 WP_349955208.1 207603..208865(+) (eeP) [Streptococcus salivarius strain KSS8]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTIGSDGKVRRINLSDRQIDQTALPMNVTAYDLEDKLTITGLVLDETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNRIQVADGGAAQVAGLKNGDAIEAINKDKVTDWDSLKE
ALTENTQKFSKGDSLSVTVKRSNGQEETVSVKPQENQGSYFLGVSPALKTSLKDKIFGGFQMAWEGAFKILVALKGLITN
FSLNKLGGPVAMFQMSAQASENGLISILNLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AIMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=940625 V6U67_RS01130 WP_349955208.1 207603..208865(+) (eeP) [Streptococcus salivarius strain KSS8]
ATGAAAGCTATTATTACCTTTTTACTGATTTTCTGTGTGATTGTCGTTTTCCATGAGTTTGGTCATTTCTTTTTCGCCAA
ACGTTCAGGAATTTTGGTTCGTGAATTTGCCATTGGTATGGGACCGAAAATTTTTGCACACACTGGTAAGGATGGTACCG
TTTATACTATCCGTATCCTCCCTTTAGGTGGTTATGTCCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACA
GGTAGCCCTGCCAGTCTAACGATTGGATCAGATGGTAAGGTAAGACGTATCAACCTTTCGGATCGCCAGATTGATCAGAC
GGCTTTGCCTATGAACGTCACTGCCTATGATTTGGAGGATAAGTTAACCATTACAGGTCTAGTCCTAGATGAGACCAAGA
CCTATGAGGTTGATCATGATGCCACTATCGTTGAGGAGGATGGTACAGAACTTCGTATCGCTCCTAAGGATGTCCAATAT
CAAAATGCAAGCATTTGGGGACGTTTAATTACCAACTTTGCTGGTCCTATGAATAACTTCATTCTTGGGGTGCTTGTCTT
TATTATCTTAGCCTTTGTTCAAGGTGGTGTTCAAGATACATCGACCAACCGTATCCAGGTAGCCGATGGAGGCGCTGCTC
AGGTGGCAGGCTTGAAAAATGGTGATGCTATCGAGGCTATCAATAAGGACAAGGTTACTGATTGGGACAGCTTGAAGGAA
GCATTGACAGAGAATACCCAAAAATTCTCCAAAGGTGACAGCCTTTCTGTGACAGTTAAGAGAAGTAACGGTCAGGAAGA
AACGGTTTCTGTTAAACCTCAGGAGAACCAAGGTAGCTATTTTTTGGGTGTTTCTCCTGCTTTAAAAACAAGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGGGCCTTCAAAATTCTCGTAGCACTTAAGGGGCTTATCACCAAC
TTTAGTTTGAATAAACTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCCCAGGCTTCAGAAAATGGCTTGATTTCCAT
TCTTAACCTTATGGGGATGCTCTCAATTAACTTGGGAATTTTCAATCTTATCCCAATTCCAGCCCTTGACGGTGGAAAAA
TTGTTATGAATATTATTGAAGCCATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATTACACTTGCAGGTGTT
GCTATCATGGTTGTTCTTATGATTGCAGTTACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(205-272)

(6-406)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

95

100

0.95

  eeP Streptococcus thermophilus LMG 18311

94.762

100

0.948