Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   V6U66_RS08815 Genome accession   NZ_CP145864
Coordinates   1894406..1895482 (-) Length   358 a.a.
NCBI ID   WP_002884703.1    Uniprot ID   A0A1W5ZBL0
Organism   Streptococcus salivarius strain KSS7     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1889406..1900482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS08790 (V6U66_08780) - 1889553..1890335 (+) 783 WP_118172067.1 ABC transporter ATP-binding protein -
  V6U66_RS08795 (V6U66_08785) - 1890519..1892585 (-) 2067 WP_221739266.1 cation:proton antiporter -
  V6U66_RS08800 (V6U66_08790) - 1892594..1892836 (-) 243 WP_014634967.1 hypothetical protein -
  V6U66_RS08805 (V6U66_08795) - 1892833..1893381 (-) 549 WP_221739267.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  V6U66_RS08810 (V6U66_08800) - 1893378..1894322 (-) 945 WP_221739268.1 TIGR01212 family radical SAM protein -
  V6U66_RS08815 (V6U66_08805) sepM 1894406..1895482 (-) 1077 WP_002884703.1 SepM family pheromone-processing serine protease Regulator
  V6U66_RS08820 (V6U66_08810) coaD 1895460..1895957 (-) 498 WP_014632676.1 pantetheine-phosphate adenylyltransferase -
  V6U66_RS08825 (V6U66_08815) rsmD 1895990..1896538 (-) 549 WP_231910681.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  V6U66_RS08830 (V6U66_08820) trxB 1896678..1897598 (-) 921 WP_014632674.1 thioredoxin-disulfide reductase -
  V6U66_RS08835 (V6U66_08825) - 1897664..1897888 (-) 225 WP_002884393.1 DUF4059 family protein -
  V6U66_RS08840 (V6U66_08830) - 1898100..1898843 (-) 744 WP_014632672.1 amino acid ABC transporter ATP-binding protein -
  V6U66_RS08845 (V6U66_08835) - 1898843..1899589 (-) 747 WP_096832659.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 38988.67 Da        Isoelectric Point: 9.2472

>NTDB_id=940599 V6U66_RS08815 WP_002884703.1 1894406..1895482(-) (sepM) [Streptococcus salivarius strain KSS7]
MANKNESKSLLGKIWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKAT
LALMLYAQLNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSADLIKYVQGLKLGSKVKVTYTTDDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGSVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPD
AKTNYQEAKEAAKKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=940599 V6U66_RS08815 WP_002884703.1 1894406..1895482(-) (sepM) [Streptococcus salivarius strain KSS7]
GTGGCAAACAAGAACGAATCTAAATCACTATTAGGGAAAATTTGGCGGATTAAGTGGTGGTTGTTAAGTATTTTTACGGT
ACTTTTCCTCCTATTTGCCCTCTTTTTCCCGCTAAATAATTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACTAAGG
AAGTCTTGACTGTAGACAAGAAAGCTGATGATTCAAAAGGATCCTACAATTTTGTGGCAGTGGCCCAAACCAAGGCGACT
TTAGCCTTGATGCTCTATGCTCAGCTTAATGATTTTGCAAAGCTTCAAACAGCTGAAGAGGCAACTGGGAATTACTCTGA
TGAAGATTTCATGCGTATCAACCAATTTTACATGGAGACTTCCCAAAACCAAGCGATTTATCAGGGCTTGACTCTGGCCG
GTAAGGAGGCTAGCTTGGAGTATATGGGTGTCTATGTGCTTCAGGTGGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCGGATACGGTGACAGCTGTCAATGGCAAGACCTTTGATAATTCTGCTGACTTGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAAGTCAAGGTCACTTATACGACAGATGACAAAGAAAAGACTGCCACTGGTAAGATTATCAAGATTGCCA
ATGGTAAAAATGGTATTGGTATCGGTTTGACAGATCATACCGAGGTTAAGAGTCCTGAAAATGTGAAGTTTAAACTTGAT
GGCGTTGGCGGACCAAGTGCGGGTCTTATGTTTACCCTAGCTATTTACGATCAGGTATCTGGTCAAGACCTCAAGGCTGG
CCGTAAGATTGCTGGAACAGGAACCATTGAAAAGGATGGTTCGGTCGGTGATATCGGTGGTGCCTACCTCAAGGTGAAAT
CAGCGGCTGATAGTGGTGCAGACATTTTCTTCGTGCCAAATAATCCAGTAACCAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAAACCAACTATCAAGAGGCCAAGGAAGCTGCCAAGAAACTGGGAACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATAA

Domains


Predicted by InterproScan.

(142-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1W5ZBL0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.396

95.251

0.623