Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   V6U66_RS08625 Genome accession   NZ_CP145864
Coordinates   1856820..1857551 (-) Length   243 a.a.
NCBI ID   WP_048674716.1    Uniprot ID   A0AB37DBL9
Organism   Streptococcus salivarius strain KSS7     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1851820..1862551
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS08600 (V6U66_08590) - 1852889..1854070 (+) 1182 WP_410534460.1 NAD(P)/FAD-dependent oxidoreductase -
  V6U66_RS08610 (V6U66_08600) trmB 1854286..1854927 (-) 642 WP_003096317.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  V6U66_RS08615 (V6U66_08605) ccrZ 1854937..1855728 (-) 792 WP_002884270.1 cell cycle regulator CcrZ -
  V6U66_RS08620 (V6U66_08610) pptB 1855786..1856823 (-) 1038 WP_048790351.1 ABC transporter permease Regulator
  V6U66_RS08625 (V6U66_08615) pptA 1856820..1857551 (-) 732 WP_048674716.1 ABC transporter ATP-binding protein Regulator
  V6U66_RS08630 (V6U66_08620) - 1857616..1858035 (+) 420 WP_048790350.1 HIT family protein -
  V6U66_RS08635 (V6U66_08625) - 1858032..1858331 (+) 300 WP_410534462.1 hypothetical protein -
  V6U66_RS08640 (V6U66_08630) - 1858788..1859807 (-) 1020 WP_171021848.1 IS30-like element IS1139 family transposase -
  V6U66_RS08645 (V6U66_08635) - 1860151..1860360 (-) 210 Protein_1651 hypothetical protein -
  V6U66_RS08650 (V6U66_08640) - 1860404..1861480 (-) 1077 WP_410534463.1 hypothetical protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26846.09 Da        Isoelectric Point: 4.4799

>NTDB_id=940597 V6U66_RS08625 WP_048674716.1 1856820..1857551(-) (pptA) [Streptococcus salivarius strain KSS7]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDSASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=940597 V6U66_RS08625 WP_048674716.1 1856820..1857551(-) (pptA) [Streptococcus salivarius strain KSS7]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGACGTGACCTTTGAGGTGGCTGATGG
CGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATTCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTCTATGAAGAGTTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGGATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTAGATTGGTTCCCGACTCAGTTTT
CAAAGGGAATGAAGCAGAAGGTTATGATTATCTGTGCCTTTATTGTTAACCCCAGTCTTTTCATTGTTGATGAACCCTTC
TTGGGTTTGGATCCCTTGGCAATCTCCGACCTAATTGAGCTTTTAGCTGAGGAAAAAGCTAAGGGCAAGGCGATTCTCAT
GTCTACCCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATCTTGCATCACGGTCAAGTCTTAGCACAGG
GGACTCTCGAGGAGCTCCGTCAGACTTTTGGCGACGATAGTGCTAGTCTTAACGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

99.177

100

0.992
  pptA Streptococcus thermophilus LMD-9

97.119

100

0.971