Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   V6U66_RS05960 Genome accession   NZ_CP145864
Coordinates   1311793..1312605 (-) Length   270 a.a.
NCBI ID   WP_004182610.1    Uniprot ID   A0AAW7PMH8
Organism   Streptococcus salivarius strain KSS7     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1306793..1317605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS05930 (V6U66_05915) - 1306991..1307755 (-) 765 WP_045771781.1 nucleoside phosphorylase -
  V6U66_RS05935 (V6U66_05920) - 1307760..1308626 (-) 867 WP_221739366.1 GNAT family N-acetyltransferase -
  V6U66_RS05940 (V6U66_05925) yidA 1308805..1309611 (+) 807 WP_155214134.1 sugar-phosphatase -
  V6U66_RS05945 (V6U66_05930) - 1309611..1310825 (+) 1215 WP_014633201.1 aminoacyltransferase -
  V6U66_RS05950 (V6U66_05935) - 1310927..1311203 (-) 277 Protein_1120 ISL3 family transposase -
  V6U66_RS05955 (V6U66_05940) - 1311375..1311734 (-) 360 WP_004182609.1 YbaN family protein -
  V6U66_RS05960 (V6U66_05945) vicX 1311793..1312605 (-) 813 WP_004182610.1 MBL fold metallo-hydrolase Regulator
  V6U66_RS05965 (V6U66_05950) vicK 1312611..1313951 (-) 1341 WP_002885062.1 cell wall metabolism sensor histidine kinase VicK Regulator
  V6U66_RS05970 (V6U66_05955) vicR 1313944..1314651 (-) 708 WP_049529327.1 response regulator YycF Regulator
  V6U66_RS05975 (V6U66_05960) - 1314940..1315707 (+) 768 WP_002885036.1 amino acid ABC transporter ATP-binding protein -
  V6U66_RS05980 (V6U66_05965) - 1315717..1316550 (+) 834 WP_049529326.1 transporter substrate-binding domain-containing protein -
  V6U66_RS05985 (V6U66_05970) - 1316568..1317266 (+) 699 WP_045772066.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30094.89 Da        Isoelectric Point: 5.1733

>NTDB_id=940583 V6U66_RS05960 WP_004182610.1 1311793..1312605(-) (vicX) [Streptococcus salivarius strain KSS7]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANENTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDLDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=940583 V6U66_RS05960 WP_004182610.1 1311793..1312605(-) (vicX) [Streptococcus salivarius strain KSS7]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTACTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGTG
ATTTGGATGCAATCTTAGTAACGCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAACGAGAACACCTGGCAGATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACCTTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTTGTCATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAAAATGCCGATGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCGACCAAGCAACGTATCCTCTCTGATCAAGGTCATTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATTG
GTAATAAAACTAAAAAGATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCAGACACAGCGACTCCACT
GACAGACATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.866

99.259

0.763