Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   V6U64_RS09115 Genome accession   NZ_CP145862
Coordinates   1974545..1975807 (-) Length   420 a.a.
NCBI ID   WP_288586305.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS4     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1969545..1980807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U64_RS09105 (V6U64_09105) - 1970195..1972134 (-) 1940 Protein_1773 ABC transporter substrate binding protein -
  V6U64_RS09110 (V6U64_09110) - 1972612..1974474 (-) 1863 WP_129852187.1 proline--tRNA ligase -
  V6U64_RS09115 (V6U64_09115) eeP 1974545..1975807 (-) 1263 WP_288586305.1 M50 family metallopeptidase Regulator
  V6U64_RS09120 (V6U64_09120) - 1975824..1976618 (-) 795 WP_179968621.1 phosphatidate cytidylyltransferase -
  V6U64_RS09125 (V6U64_09125) - 1976631..1977380 (-) 750 WP_002886457.1 isoprenyl transferase -
  V6U64_RS09130 (V6U64_09130) - 1977509..1977847 (-) 339 WP_002889798.1 preprotein translocase subunit YajC -
  V6U64_RS09135 (V6U64_09135) - 1977973..1978689 (-) 717 WP_049545128.1 YebC/PmpR family DNA-binding transcriptional regulator -
  V6U64_RS09140 (V6U64_09140) - 1978844..1980421 (-) 1578 WP_410536589.1 ATP-binding cassette domain-containing protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45850.24 Da        Isoelectric Point: 5.8010

>NTDB_id=940471 V6U64_RS09115 WP_288586305.1 1974545..1975807(-) (eeP) [Streptococcus salivarius strain KSS4]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTIGSDGKVRRINLSDRQIDQTALPMNVTAYDLEDKLTITGLVLDETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNRIQVADGGAAQVAGLKNGDAIEAINKDKVTDWDSLKE
ALTENTQKFSKGDSLSVTVKRSNGQEEIISVKPQENQGSYFLGVSPALKTSLKDKIFGGFQMAWEGAFKILVALKGLITN
FSLNKLGGPVAMFQMSAQASENGLISILNLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AIMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=940471 V6U64_RS09115 WP_288586305.1 1974545..1975807(-) (eeP) [Streptococcus salivarius strain KSS4]
ATGAAAGCTATTATTACCTTTTTACTGATTTTCTGTGTGATTGTCGTTTTCCATGAGTTTGGTCATTTCTTTTTCGCCAA
ACGCTCAGGAATTTTGGTTCGTGAATTTGCCATTGGTATGGGACCGAAAATTTTTGCACACACTGGTAAGGATGGTACCG
TTTATACTATCCGTATCCTCCCTTTAGGTGGTTATGTCCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACA
GGTAGCCCTGCCAGTCTAACGATTGGATCAGATGGTAAGGTAAGACGTATCAACCTTTCGGATCGCCAGATTGATCAGAC
GGCTTTACCTATGAACGTCACTGCCTATGATTTGGAGGATAAGTTAACCATTACAGGTCTAGTCCTAGATGAGACCAAGA
CCTATGAGGTTGATCATGATGCCACTATCGTTGAGGAGGATGGTACAGAACTTCGTATCGCTCCTAAGGATGTCCAATAT
CAAAATGCAAGCATTTGGGGACGTTTAATTACCAACTTTGCTGGTCCTATGAATAACTTCATTCTTGGGGTGCTTGTCTT
TATTATCTTAGCCTTTGTTCAAGGAGGTGTTCAAGATACATCGACCAACCGTATCCAGGTAGCCGATGGAGGCGCTGCTC
AGGTGGCAGGCTTGAAAAATGGTGATGCCATCGAGGCTATCAATAAGGACAAGGTTACTGATTGGGACAGCTTGAAGGAA
GCATTGACAGAGAATACCCAAAAATTCTCCAAAGGTGACAGCCTTTCTGTGACAGTTAAGAGAAGTAACGGTCAGGAAGA
AATAATCTCTGTTAAACCTCAGGAGAACCAAGGTAGCTATTTTTTGGGTGTTTCTCCTGCTTTAAAAACAAGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGGGCCTTCAAAATTCTCGTAGCACTTAAGGGGCTTATCACCAAC
TTTAGTTTGAATAAACTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCCCAGGCTTCAGAAAATGGCTTGATTTCCAT
TCTTAACCTTATGGGGATGCTCTCAATTAACTTGGGAATTTTCAATCTTATCCCAATTCCAGCCCTTGACGGTGGAAAAA
TTGTTATGAATATTATTGAAGCCATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATTACACTTGCAGGTGTT
GCTATCATGGTTGTTCTTATGATTGCAGTTACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(205-268)

(6-406)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

95

100

0.95

  eeP Streptococcus thermophilus LMG 18311

94.762

100

0.948