Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   V6U63_RS02085 Genome accession   NZ_CP145861
Coordinates   396795..398609 (+) Length   604 a.a.
NCBI ID   WP_195187786.1    Uniprot ID   A0AB35IPE9
Organism   Streptococcus salivarius strain KSS3     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 391795..403609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U63_RS02065 (V6U63_02070) gdhA 392397..393749 (+) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -
  V6U63_RS02070 (V6U63_02075) - 394348..395595 (+) 1248 WP_227071873.1 YfhO family protein -
  V6U63_RS02075 (V6U63_02080) - 395753..396163 (+) 411 WP_014633541.1 peptide deformylase -
  V6U63_RS02080 (V6U63_02085) rcrR 396348..396791 (+) 444 WP_195187787.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  V6U63_RS02085 (V6U63_02090) rcrP 396795..398609 (+) 1815 WP_195187786.1 ABC transporter ATP-binding protein Regulator
  V6U63_RS02090 (V6U63_02095) rcrQ 398599..400377 (+) 1779 WP_195187785.1 ABC transporter ATP-binding protein Regulator
  V6U63_RS02095 (V6U63_02100) - 400485..401108 (+) 624 WP_195187784.1 GNAT family N-acetyltransferase -
  V6U63_RS02100 (V6U63_02105) - 401256..401879 (+) 624 WP_195187783.1 GTP pyrophosphokinase family protein -
  V6U63_RS02105 (V6U63_02110) - 401881..402558 (+) 678 WP_195187782.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67070.72 Da        Isoelectric Point: 6.1431

>NTDB_id=940365 V6U63_RS02085 WP_195187786.1 396795..398609(+) (rcrP) [Streptococcus salivarius strain KSS3]
MFKIFKRLTTKELIMIVLAVIFVCLNVYLNLKIPDYMSDITTLLSTKGTKASDIFAWNTDAPGMRMLLMSFAGFMASVVV
GFLAARTAASFTTRLRDDIFHQVLDFSDAEIKKFSIPSLLTRTTNDITQLQMVLTMGLQVITQGPIMAIWAITKIADKNG
NWLLALLVAVAVIAILMLFLLIMVMPKQRLIQTLTDKLNSVTRESLTGIRVVRAYNAESYQEEKFEKANTDLTQNNLFIG
RSFALLTPVMTAVSSGLTLAIYWIGAHLIEDVKIPTDPTKIAGAMENKVHLFSDMVVYSSYAMQVVMGFMMMIVVFFLLP
RAVVAAGRINEVLDTQSSVSYPENSSEKPKEVGTVEFDDVSFRYSETSEPVLEHVSFKAKKGDTVAFIGSTGSGKSTLVN
LIPRFYDATQGTIKVDGVDVRHYDHETLHNIVGYIPQKAVLFSGDITSNMTMGTSNNSPLDDAKNWEALELAQGKDFVEN
KEGQLKAEVAQAGSNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRKLRQELAEKTQEMTKLIVAQRISTIMDA
DQILVLDQGKVVGQGTHKELLANNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=940365 V6U63_RS02085 WP_195187786.1 396795..398609(+) (rcrP) [Streptococcus salivarius strain KSS3]
ATGTTTAAAATTTTTAAACGTTTGACGACAAAAGAGTTAATCATGATTGTCTTAGCGGTGATTTTTGTTTGCTTGAACGT
CTATCTAAACTTGAAAATTCCAGACTATATGTCTGATATTACGACACTCTTATCAACTAAGGGAACTAAGGCGTCGGATA
TTTTTGCCTGGAATACAGATGCCCCAGGGATGCGAATGCTTTTAATGTCATTTGCAGGCTTTATGGCTTCTGTAGTGGTT
GGTTTCTTAGCTGCCAGAACAGCGGCAAGTTTTACCACTCGTCTTCGTGATGATATCTTCCATCAGGTTCTAGATTTTTC
GGATGCAGAGATTAAGAAATTCTCAATTCCTAGTCTTTTGACCCGTACGACAAATGATATTACCCAATTGCAGATGGTAC
TTACCATGGGGTTACAGGTTATTACACAGGGGCCTATCATGGCCATTTGGGCGATTACAAAGATTGCCGATAAAAATGGG
AACTGGCTCCTTGCCTTGCTTGTCGCTGTGGCAGTGATTGCCATTCTCATGCTCTTCCTCTTGATTATGGTTATGCCTAA
GCAACGCTTGATTCAAACTCTGACCGATAAACTGAATAGCGTAACGCGTGAATCTCTTACTGGAATTCGTGTGGTGCGTG
CCTATAACGCCGAAAGTTACCAAGAGGAGAAATTTGAAAAGGCCAATACTGATTTGACCCAAAACAACCTCTTTATCGGT
CGTTCTTTTGCCTTACTGACACCGGTGATGACTGCTGTATCAAGTGGTTTGACACTGGCTATTTATTGGATTGGTGCGCA
TTTGATTGAAGATGTTAAGATTCCAACAGATCCAACTAAGATTGCTGGTGCCATGGAAAATAAGGTCCATCTCTTCTCAG
ACATGGTGGTTTATTCATCTTATGCCATGCAGGTTGTTATGGGATTCATGATGATGATTGTTGTTTTCTTCCTTCTTCCA
CGTGCAGTTGTAGCAGCTGGTCGTATCAATGAAGTTCTAGATACGCAATCTTCAGTCTCTTACCCTGAAAATAGTTCTGA
AAAACCTAAAGAAGTGGGTACTGTCGAATTTGATGATGTTTCCTTCCGTTATTCTGAAACTTCAGAGCCTGTTTTGGAGC
ATGTTAGCTTCAAAGCTAAAAAAGGTGACACGGTTGCCTTTATTGGTTCGACTGGATCTGGTAAATCAACGCTTGTCAAC
CTTATCCCACGTTTTTATGATGCCACGCAAGGAACGATCAAGGTTGACGGTGTCGATGTGCGACATTATGACCATGAAAC
CTTGCACAATATAGTCGGTTATATTCCACAGAAGGCAGTGCTTTTCTCAGGTGATATCACGTCAAATATGACGATGGGAA
CGAGCAATAACAGTCCTCTTGATGATGCTAAGAATTGGGAAGCTCTCGAATTGGCTCAAGGAAAAGACTTTGTTGAAAAT
AAAGAAGGTCAACTTAAAGCAGAAGTTGCCCAAGCTGGGTCTAACTTCTCAGGTGGACAGAAGCAACGTTTGGCTATTGC
GCGTGCCTTGGCACGTAAGCCTGAAATCTTGATTTTCGATGATTCCTTCTCAGCCTTGGACTATAAGACCGATCGTAAGT
TACGTCAAGAACTGGCTGAAAAAACACAAGAGATGACCAAGTTGATTGTTGCTCAACGTATCTCTACTATTATGGATGCG
GATCAAATCTTGGTACTTGACCAAGGTAAGGTCGTTGGTCAAGGAACTCACAAGGAACTCTTGGCAAATAATGAGGTTTA
CCAAGAAATTGCCTATTCACAATTGTCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-271)

ABC transporter (ABC_tran)

(372-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.264

100

0.684