Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   V6U62_RS05510 Genome accession   NZ_CP145860
Coordinates   1223764..1224576 (-) Length   270 a.a.
NCBI ID   WP_013990680.1    Uniprot ID   A0AAX1YAX4
Organism   Streptococcus salivarius strain KSS2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1218764..1229576
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U62_RS05485 (V6U62_05475) - 1219756..1220142 (-) 387 WP_002884910.1 DUF1934 domain-containing protein -
  V6U62_RS05490 (V6U62_05480) - 1220225..1221091 (-) 867 WP_145516924.1 GNAT family N-acetyltransferase -
  V6U62_RS05495 (V6U62_05485) yidA 1221269..1222078 (+) 810 WP_002890845.1 sugar-phosphatase -
  V6U62_RS05500 (V6U62_05490) - 1222080..1223294 (+) 1215 WP_037611659.1 aminoacyltransferase -
  V6U62_RS05505 (V6U62_05495) - 1223346..1223705 (-) 360 WP_037611660.1 YbaN family protein -
  V6U62_RS05510 (V6U62_05500) vicX 1223764..1224576 (-) 813 WP_013990680.1 MBL fold metallo-hydrolase Regulator
  V6U62_RS05515 (V6U62_05505) vicK 1224579..1225922 (-) 1344 WP_410535408.1 cell wall metabolism sensor histidine kinase VicK Regulator
  V6U62_RS05520 (V6U62_05510) vicR 1225915..1226622 (-) 708 WP_002884978.1 response regulator YycF Regulator
  V6U62_RS05525 (V6U62_05515) - 1226907..1227674 (+) 768 WP_021145491.1 amino acid ABC transporter ATP-binding protein -
  V6U62_RS05530 (V6U62_05520) - 1227684..1228517 (+) 834 WP_410535406.1 transporter substrate-binding domain-containing protein -
  V6U62_RS05535 (V6U62_05525) - 1228535..1229233 (+) 699 WP_002886251.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30108.96 Da        Isoelectric Point: 5.3499

>NTDB_id=940315 V6U62_RS05510 WP_013990680.1 1223764..1224576(-) (vicX) [Streptococcus salivarius strain KSS2]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=940315 V6U62_RS05510 WP_013990680.1 1223764..1224576(-) (vicX) [Streptococcus salivarius strain KSS2]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTACTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGTG
ATTTGGATGCAATCTTAGTAACGCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATATACGCCAACGAGAAAACCTGGCAAATTATGGATAGTAAAAATATGCTTGGTAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTTGTCATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAAAATGCCGATGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATTG
GTAATAAAACTAAAAAAATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCAGACACAGCGACTCCACT
GACAGACATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.239

99.259

0.767