Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   V6T26_RS05460 Genome accession   NZ_CP145858
Coordinates   1198752..1199564 (-) Length   270 a.a.
NCBI ID   WP_371595677.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS11     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1193752..1204564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6T26_RS05435 (V6T26_05435) - 1194742..1195128 (-) 387 WP_049545096.1 DUF1934 domain-containing protein -
  V6T26_RS05440 (V6T26_05440) - 1195221..1196078 (-) 858 WP_410541043.1 GNAT family N-acetyltransferase -
  V6T26_RS05445 (V6T26_05445) yidA 1196257..1197066 (+) 810 WP_145516925.1 sugar-phosphatase -
  V6T26_RS05450 (V6T26_05450) - 1197068..1198282 (+) 1215 WP_371595679.1 aminoacyltransferase -
  V6T26_RS05455 (V6T26_05455) - 1198334..1198693 (-) 360 WP_371595678.1 YbaN family protein -
  V6T26_RS05460 (V6T26_05460) vicX 1198752..1199564 (-) 813 WP_371595677.1 MBL fold metallo-hydrolase Regulator
  V6T26_RS05465 (V6T26_05465) vicK 1199570..1200910 (-) 1341 WP_410541045.1 cell wall metabolism sensor histidine kinase VicK Regulator
  V6T26_RS05470 (V6T26_05470) vicR 1200903..1201610 (-) 708 WP_002884978.1 response regulator YycF Regulator
  V6T26_RS05475 (V6T26_05475) - 1201896..1202663 (+) 768 WP_002885036.1 amino acid ABC transporter ATP-binding protein -
  V6T26_RS05480 (V6T26_05480) - 1202673..1203506 (+) 834 WP_410541046.1 transporter substrate-binding domain-containing protein -
  V6T26_RS05485 (V6T26_05485) - 1203524..1204222 (+) 699 WP_002886251.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30048.93 Da        Isoelectric Point: 5.3498

>NTDB_id=940249 V6T26_RS05460 WP_371595677.1 1198752..1199564(-) (vicX) [Streptococcus salivarius strain KSS11]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVCDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=940249 V6T26_RS05460 WP_371595677.1 1198752..1199564(-) (vicX) [Streptococcus salivarius strain KSS11]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTACTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGTG
ATTTGGATGCAATCTTAGTAACGCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATATACGCCAACGAGAAAACCTGGCAAATTATGGATAGTAAAAATATGCTTGGTAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTCGTTATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAGAATGCCGACGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCAACCAAGCAACGTATTCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATCTACTTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTGTGATACCTCACCGGACACAGCGACTCCACT
GACAGACATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.866

99.259

0.763